prot_L-elsbetiae_contig5998.14505.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5998.14505.1
Unique Nameprot_L-elsbetiae_contig5998.14505.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length249
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5998.14505.1 vs. uniprot
Match: A0A6H5K219_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K219_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.120e-37
Identity = 75/126 (59.52%), Postives = 91/126 (72.22%), Query Frame = 0 
Query:  128 MNKQLWELEEKRLVGGCCDTSKPPSGEIQVVTPHGAGGPPPR----SSRDVLTKILTARHVVDRRSLLEYSLHVGKAEHFEHLACWLRWKLGIGGLVSQLREPGINGAPLLFQAVKTTACFEAVKK 249
            +NK LW LEEKR   G CDTS PP+G+ Q     G  G P +    +SRD  TK+L+AR V+DRRS+LEY+  +GKA HFE LA WLRWKLG+G LV+QLREPG++GAPLLFQAV    CF+AV K
Sbjct:  144 LNKYLWRLEEKRQPLGGCDTSLPPTGDNQ-----GEAGQPNQQQSWASRDAATKVLSARDVMDRRSILEYAAALGKASHFEDLARWLRWKLGVGSLVNQLREPGVDGAPLLFQAVNVDECFKAVTK 264
[Close]
BLAST of mRNA_L-elsbetiae_contig5998.14505.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 5.640e-36
Identity = 76/126 (60.32%), Postives = 90/126 (71.43%), Query Frame = 0 
Query:  128 MNKQLWELEEKRLVGGCCDTSKPPSGEIQVVTPHGAGGPPPR----SSRDVLTKILTARHVVDRRSLLEYSLHVGKAEHFEHLACWLRWKLGIGGLVSQLREPGINGAPLLFQAVKTTACFEAVKK 249
            +NK LW LEEKR   G CDTS PP  + Q     G  G P +    +SRD  TK+L+AR V+DRRSLLEY+  +GKA HFE LA WLRWKLG+GGLV+QLREPG++GAPLLFQAV    CF+AV K
Sbjct:  188 LNKYLWRLEEKRHPLGGCDTSVPPIRDNQ-----GEAGQPYQQQSWASRDATTKVLSARDVMDRRSLLEYAAALGKASHFEDLALWLRWKLGVGGLVNQLREPGVDGAPLLFQAVNIDECFKAVTK 308
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5998.14505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K219_9PHAE2.120e-3759.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMR2_ECTSI5.640e-3660.32Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5998contigL-elsbetiae_contig5998:5748..10547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5998.14505.1mRNA_L-elsbetiae_contig5998.14505.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5998 5748..10548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5998.14505.1 ID=prot_L-elsbetiae_contig5998.14505.1|Name=mRNA_L-elsbetiae_contig5998.14505.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
CSETGGHTYKRERGVGSACELASLPTTQLRQVKVNKLRGIISGEDEDDDV
PTDGRLRDSSRAAEEKKSPDSKTSPPAEENKPHGGLVDVGDVATTTGSGW
KPPPPPPPLPPSRADWTREASPAPPRSMNKQLWELEEKRLVGGCCDTSKP
PSGEIQVVTPHGAGGPPPRSSRDVLTKILTARHVVDRRSLLEYSLHVGKA
EHFEHLACWLRWKLGIGGLVSQLREPGINGAPLLFQAVKTTACFEAVKK
back to top