prot_L-elsbetiae_contig599.14499.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig599.14499.1
Unique Nameprot_L-elsbetiae_contig599.14499.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length464
Homology
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BLAST of mRNA_L-elsbetiae_contig599.14499.1 vs. uniprot
Match: D7G862_ECTSI (Pc13g00620 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G862_ECTSI)

HSP 1 Score: 501 bits (1289), Expect = 3.580e-172
Identity = 293/469 (62.47%), Postives = 345/469 (73.56%), Query Frame = 0 
Query:    6 DGTRRFMHAVATMILVACSLPCAGGQDASSATAVQ----ALKDAVAG---------AVLVADETESPGLLLDRGTALLLGGNSKGAVDVLDAAIVAWEEESGSKNLESTGAALTAQRLGKALALEGELERAAAAFRRAVAASEVVFGRESEETVASLTDLGLTLNQQGQFPGAASALARSLQARALKSNEGVAMKTRDATKNLEGLVTALLQRPRVEGESELDGALLAVDHVNRLAWRYFVQDLPLQGESVMQKGLEYFEKIRDGAGLGPSGPQDLAISAFLFNIGFLQLAVIGRYESAAKVLQRAHALRKAVIGEVHSLTVQAMVSRGWALTLTGKTLLAVEELTSSAKALLDDGQAHAADRLLRQALQQGYTPLGPATYANACFTQHRNMLKGWGAEGAEKSNKFFQTQMDIADDAALSGKEAAMKLATKTLARALRQEVEDDAGGSELLQLSPADKERLKEEIALL 461
            DG RRFMHA+A M+LVACS PCA G D SSA AVQ    AL+DAV G          V+VA E +SPG LLDRGTALL  G SK AV  LDAAI  WEEE GS+ L S  AALTAQRLG+ALALEG+ ERAA+ F RAV ASE +FG +S + VA LT LGL L +QGQ   AAS L R+L   AL+ +EG+   T+D TK L+GL  +L++RP   GESEL GALLAVDH+N LA RYFVQ LP QGESV+Q    Y EK  D     PS  +DL ISA LFN+GFL+LAV+G + SAA VLQ+A  LRKAV+GE HSLT+QA+VSRGWALTLTG TLLAVEELTS+A+ALL  GQ HAADRLLRQ LQQGY PLG ATYA+AC+TQH NML+ WG+EG  K++ F   Q++IA  A L+GKE  MK AT+TLA A+R ++ED+  G ELL+L+P+DKERL EEI LL
Sbjct:    6 DGARRFMHALAAMLLVACSFPCAVG-DGSSAAAVQQKAKALRDAVEGNNRAPPAAEPVVVAPERDSPGSLLDRGTALLYAGKSKDAVAALDAAITGWEEEMGSEKLNSEAAALTAQRLGEALALEGDHERAASVFGRAVVASEALFGVKSTQAVACLTGLGLALFRQGQLSDAASTLGRALSVHALRPDEGMVTSTQDVTKTLDGLAKSLIRRPPEGGESELGGALLAVDHINPLAGRYFVQKLPHQGESVLQS--LYVEK-EDAGSSEPSALRDLVISALLFNLGFLRLAVLGEFSSAASVLQQAIELRKAVLGEAHSLTMQAVVSRGWALTLTGDTLLAVEELTSAAEALLSAGQPHAADRLLRQGLQQGYDPLGGATYAHACYTQHSNMLRAWGSEGIAKADAFCLNQLNIAKKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLKLNPSDKERLWEEIGLL 470
[Close]
BLAST of mRNA_L-elsbetiae_contig599.14499.1 vs. uniprot
Match: A0A6H5JX93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX93_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.850e-44
Identity = 100/166 (60.24%), Postives = 116/166 (69.88%), Query Frame = 0 
Query:    6 DGTRRFMHAVATMILVACSLPCAGGQDASSATAVQ---ALKDAV---------AGAVLVADETESPGLLLDRGTALLLGGNSKGAVDVLDAAIVAWEEESGSKNLESTGAALTAQRLGKALALEGELERAAAAFRRAVAASEVVFGRESEETVASLTDLGLTLNQQ 159
            DG RRFMHA+A M+LVACS PCA G  +S+A  +Q   AL+DAV         A  V+V  E +SPG LL+RGTALL  GNSK AV  LDAAI  WEEE GS+ L S  AALTAQRLG+ALALEG+ ERAA+ F RAV ASE +FG +S + VA LT LGL L QQ
Sbjct:    6 DGARRFMHALAAMLLVACSFPCAVGDGSSAAAVLQKAKALRDAVEDNNRAPPAAHPVVVVPERDSPGSLLERGTALLYEGNSKDAVAALDAAITGWEEEMGSEKLNSEAAALTAQRLGEALALEGDHERAASVFGRAVVASEALFGVKSTQAVACLTGLGLALFQQ 171
[Close]
BLAST of mRNA_L-elsbetiae_contig599.14499.1 vs. uniprot
Match: A0A6H5JZA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZA8_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 6.680e-38
Identity = 75/119 (63.03%), Postives = 90/119 (75.63%), Query Frame = 0 
Query:  343 ALLDDGQAHAADRLLRQALQQGYTPLGPATYANACFTQHRNMLKGWGAEGAEKSNKFFQTQMDIADDAALSGKEAAMKLATKTLARALRQEVEDDAGGSELLQLSPADKERLKEEIALL 461
            ALL  GQ HAADRLLRQ LQQGY PLG ATYA+AC+TQH  ML+ WG+EG  K++ F   Q+DIA  A L+GKE  MK AT+TLA A+R ++ED+  G ELL+L+P DKERL EEI LL
Sbjct:   18 ALLSAGQPHAADRLLRQGLQQGYDPLGGATYAHACYTQHSTMLRAWGSEGIAKADAFCLNQLDIAKKARLTGKERPMKRATRTLAVAVRAQIEDETEGRELLELNPGDKERLWEEIGLL 136
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig599.14499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G862_ECTSI3.580e-17262.47Pc13g00620 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JX93_9PHAE1.850e-4460.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZA8_9PHAE6.680e-3863.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 451..463
NoneNo IPR availablePFAMPF13424TPR_12coord: 105..176
e-value: 8.5E-9
score: 35.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..463
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.683
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 240..383
e-value: 4.3E-5
score: 25.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 31..208
e-value: 6.3E-12
score: 47.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 224..351
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 54..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig599contigL-elsbetiae_contig599:18155..25043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig599.14499.1mRNA_L-elsbetiae_contig599.14499.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig599 18105..25228 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig599.14499.1 ID=prot_L-elsbetiae_contig599.14499.1|Name=mRNA_L-elsbetiae_contig599.14499.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=464bp
MSRQIDGTRRFMHAVATMILVACSLPCAGGQDASSATAVQALKDAVAGAV
LVADETESPGLLLDRGTALLLGGNSKGAVDVLDAAIVAWEEESGSKNLES
TGAALTAQRLGKALALEGELERAAAAFRRAVAASEVVFGRESEETVASLT
DLGLTLNQQGQFPGAASALARSLQARALKSNEGVAMKTRDATKNLEGLVT
ALLQRPRVEGESELDGALLAVDHVNRLAWRYFVQDLPLQGESVMQKGLEY
FEKIRDGAGLGPSGPQDLAISAFLFNIGFLQLAVIGRYESAAKVLQRAHA
LRKAVIGEVHSLTVQAMVSRGWALTLTGKTLLAVEELTSSAKALLDDGQA
HAADRLLRQALQQGYTPLGPATYANACFTQHRNMLKGWGAEGAEKSNKFF
QTQMDIADDAALSGKEAAMKLATKTLARALRQEVEDDAGGSELLQLSPAD
KERLKEEIALLEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf