prot_L-elsbetiae_contig5986.14491.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5986.14491.1
Unique Nameprot_L-elsbetiae_contig5986.14491.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length162
Homology
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BLAST of mRNA_L-elsbetiae_contig5986.14491.1 vs. uniprot
Match: D8LIF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF6_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 4.710e-14
Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 0 
Query:  101 KVSELTFLCEELQKRVVSLQSGEEVKASQRQVTEAFALAERQDKLLEDASARLDELKAESR 161
            KVSEL+  CEELQK VV L+SGEEV+ S+R+  EAFALAERQD+LLED SARL  LKAES+
Sbjct:   77 KVSELSLRCEELQKHVVVLKSGEEVQGSRRKAAEAFALAERQDQLLEDTSARLGHLKAESK 137
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5986.14491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIF6_ECTSI4.710e-1472.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 12..32
NoneNo IPR availableCOILSCoilCoilcoord: 139..161
NoneNo IPR availableCOILSCoilCoilcoord: 36..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5986contigL-elsbetiae_contig5986:5983..9943 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5986.14491.1mRNA_L-elsbetiae_contig5986.14491.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5986 5983..9943 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5986.14491.1 ID=prot_L-elsbetiae_contig5986.14491.1|Name=mRNA_L-elsbetiae_contig5986.14491.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
LEADVASRAKEIQRCRDEALGLQNALSRANSRLARLDALEADGRARANEL
KELQEERRESDDNLARERDRTQHLVGALRDMEAESAVLSSREEELRHLEP
KVSELTFLCEELQKRVVSLQSGEEVKASQRQVTEAFALAERQDKLLEDAS
ARLDELKAESR*
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