prot_L-elsbetiae_contig598.14483.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig598.14483.1
Unique Nameprot_L-elsbetiae_contig598.14483.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length390
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig598.14483.1 vs. uniprot
Match: D8LK01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK01_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 2.560e-46
Identity = 79/94 (84.04%), Postives = 87/94 (92.55%), Query Frame = 0 
Query:    1 MSLQGSIHTWSDGIGYGAFIPTDRAYYNVRTPRASGRRPSSEQLREYRRNNVTGGIDTHRSDMSFGKTAESVRGGREGNPRAREATKSLTSGEV 94
            MSLQGSIHTWSDGIGYGAF+PTDRAY+NVRTPRAS RRPSSE +REYRRNNVT GIDTHRSD+SFG+  ES+RGG +G+ RAREATKSLTSGEV
Sbjct:    1 MSLQGSIHTWSDGIGYGAFMPTDRAYFNVRTPRASVRRPSSENVREYRRNNVTAGIDTHRSDVSFGRNTESIRGGVDGDSRAREATKSLTSGEV 94
[Close]
BLAST of mRNA_L-elsbetiae_contig598.14483.1 vs. uniprot
Match: A0A6H5KS57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS57_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 6.020e-30
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 0 
Query:  313 PPSPLSAPSAARPPR-HALDPVFDRHHKYDLIAEERAAQGGEVTGRFGDVHGSSVLAASLLTSELSTPWSHVLRGQRW 389
            PP+P SA   A+PPR  +LDPVFDRHHKYDL+AEERAA+G  VTGRFG + G SVLAASLLTSELSTPWSHVLRGQ+W
Sbjct:    2 PPAPSSA---AKPPRFRSLDPVFDRHHKYDLVAEERAAEGMMVTGRFGPIQGPSVLAASLLTSELSTPWSHVLRGQKW 76
[Close]
BLAST of mRNA_L-elsbetiae_contig598.14483.1 vs. uniprot
Match: A0A835YTX7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX7_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.770e-11
Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = 0 
Query:    3 LQGSIHTWSDGIGYGAFIPTDRAYYNVRTPRASGRRPSSEQLREYRRNNVTGGIDTHRSDMSFGKTAESVRGGREGNPRAREATKSLTSGEV 94
            + GS H  +DG G G ++P+D+A+YN+ T R    R  + Q   YRR+N   GI+THRSD+S+G T   +  G      A      LTSGEV
Sbjct:    1 MHGSKHRMTDGYGCGQYVPSDKAFYNMHTARPGDHRRPTNQT--YRRDNSLVGIETHRSDISYGHTVARISTGPNAERLATLHATMLTSGEV 90
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig598.14483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LK01_ECTSI2.560e-4684.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS57_9PHAE6.020e-3076.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTX7_9STRA1.770e-1141.30Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig598contigL-elsbetiae_contig598:27429..29389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig598.14483.1mRNA_L-elsbetiae_contig598.14483.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig598 27429..29389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig598.14483.1 ID=prot_L-elsbetiae_contig598.14483.1|Name=mRNA_L-elsbetiae_contig598.14483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=390bp
MSLQGSIHTWSDGIGYGAFIPTDRAYYNVRTPRASGRRPSSEQLREYRRN
NVTGGIDTHRSDMSFGKTAESVRGGREGNPRAREATKSLTSGEVGGFVWP
AERARDGDVETILASSSAAASNGSVVASSLSLSGRRGSKNAIPPTLLSPH
SVKRHQKAAEAQVVSARERERRLPQHQPLRGEGIKMLPSSHRSGGSTQRS
DSTYAPSSSSIGSSTSSRQSSFRSIASPSSEHRNSGRRSSSSSSSSSSSS
RNRSSSSSSSSNSRTPRPTHYDATNKGGTLIAAEQQLSHQSSKSSARENR
LRPPTLLAHGAPPPSPLSAPSAARPPRHALDPVFDRHHKYDLIAEERAAQ
GGEVTGRFGDVHGSSVLAASLLTSELSTPWSHVLRGQRW*
back to top