prot_L-elsbetiae_contig597.14466.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig597.14466.1
Unique Nameprot_L-elsbetiae_contig597.14466.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length972
Homology
BLAST of mRNA_L-elsbetiae_contig597.14466.1 vs. uniprot
Match: A0A6H5J997_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J997_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 5.110e-85
Identity = 328/764 (42.93%), Postives = 370/764 (48.43%), Query Frame = 0
Query:   39 WEAASKAARKKRAPKETRVR-HSYVVRKPAAAPFWLSPGVQFGRSNCRGWFPTRQDWSAQGIPQCVYVPLEPSTEDRVEAMRSGHERAVGLTMEEDEERLMRIAIRESAAESRRAYEKKYGTEAXXXXXXXXXXXXXXXXLAERESLERDEEKQLMEVIKASLDISLGAGEKDDRDVIAAIETSKRENSANGHGGEEEQEEDPEILKAIAESRRQHEAMQELLRAHGALPRAPDPAVAADASGVLTPEERTDQYATPGRGATLPVAGETANMAASFANQPNPVVSAXXXXXXXXXXXXXXXXCXXXXQFAPPQTYAQERRTELLPTASESFPAPLTAAATPAGPTAERAHAGPVVGQVQAVPQDYRQGXXXXXXXXHRVEDNSGGMGGVH-ATPXXXXXX----------------VYLPH-TSTAG--EMEPPPGLQPPVAPATTAPGATPNPLTFGPGAGSSSRDEKSMQQTVMRTMQTQFNADRLPSGGXXXXXXDGET---GMMVNPATHASPLWEGGXXXXXXXXXXHATARVSPLASVTKTMPPQSLNYAGGAEPTTCASETPLKGGPQQSTPYHHQRVGAP-----------------------------QLAGWAVR------TPAHGAAAAPVAAKGKPKPAWGAAGLASDGLTAEERELREVLEASREAEEAXXXXXAAEEXXXXXXXXXXXXXXXXARQRQEKEARVAVELALKRSIMAASAVTPYGTGYLGGNGN----DGSLRPSPAQPPP 739
            WEAAS   RK+R  KETRV  HSYVVRK AAAPFWLSPGVQFGRSNCRGWFPTRQDWSA+GIPQC+YVPLEPSTEDRVEAMR GHER VGLT+EEDEERLMRIAIRESAAESRRAYEKKYGTEA                +AE ESL+RDEEKQLMEVIKASL  SLGAGEKDDRDVIAA+E SKR++  N      E+ ED ++LK + ESRRQHEAMQEL R HG +   P             P  ++              A ETA  A S+A       +  XXXXXXXXXXXXXXX XXXX                +P A +   + L  AA PAG            G +QA  Q Y QG           +  S GM   H ATP  XXXX                VY PH T   G   ME            TT PG  P          +S       +Q      Q      R   G      X   T   G+  +P+          XXXXXXXX     A  +P A   +         A   +   C   TPL    QQ  P   Q  GA                              QLAGWAVR       P  G    P  A    K AWGAAG ASDGL+AEEREL  VLEASR  EE                           R+R+E E+++A+++ALK S+M ASA    G  Y    GN      +    P QPPP
Sbjct:  964 WEAAS---RKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAEREKRREAHAKARVKAMAECESLQRDEEKQLMEVIKASLVESLGAGEKDDRDVIAALEASKRDSEYNAR----EEGEDADVLKVMVESRRQHEAMQELRRVHGDMSSVP-------------PHSQS--------------AAETATTAVSYAGDQT---NHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVPMAPDWLVSELPVAA-PAG----------AAGFMQAPRQGY-QG-----------QAYSAGMNQGHTATPPTXXXXXXXXXXXXXXXXXXXAVYAPHATGDCGGVHME------------TTHPGLEPT---------NSQHAYSVQEQQXXXXXQPMRIPARFDDGNLAMPPXXXATAPVGVPTSPSVQGPXXXXXXXXXXXXXXTLDHRAEATPCALAGR-------QPASSQQTILCHGTTPLLTAQQQPWP---QGSGAELSGYMMMNGXXXXXXXXXXXXXXXXXXXAQLAGWAVRGSATCGAPGGGGVLPP--APPVRKAAWGAAGQASDGLSAEERELEAVLEASRIEEET--------------------------RRREEAESKIAMDMALKMSMMEASAAPSGGERYGHDRGNYYQQPAATTGYPTQPPP 1608          
BLAST of mRNA_L-elsbetiae_contig597.14466.1 vs. uniprot
Match: D7FRG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG7_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 6.440e-67
Identity = 156/204 (76.47%), Postives = 168/204 (82.35%), Query Frame = 0
Query:    1 MNAGKPKA-SKPGGRRRAAGTVAAAAGVRFQGTIIEE--DTWEAASKAARKKRAPKETRVR-HSYVVRKPAAAPFWLSPGVQFGRSNCRGWFPTRQDWSAQGIPQCVYVPLEPSTEDRVEAMRSGHERAVGLTMEEDEERLMRIAIRESAAESRRAYEKKYGTEAXXXXXXXXXXXXXXXXLAERESLERDEEKQLMEVIKASL 200
            +N+ K  A +KP GRR+A              T+ EE  + WEAAS   RK+R  KETRV  HSYVVRK AAAPFWLSPGVQFGRSNCRGWFPTRQDWSA+GIPQC+YVPLEPSTEDRVEAMR GHER VGLT+EEDEERLMRIAIRESAAESRRAYEKKYGTEA  XXXXXXXXXXXXX +AERESL+RDEEKQLMEVIKASL
Sbjct:   27 LNSNKASARAKPRGRRKAXXXX-----XXXLRTVKEEKEEAWEAAS---RKRRGQKETRVAPHSYVVRKTAAAPFWLSPGVQFGRSNCRGWFPTRQDWSARGIPQCIYVPLEPSTEDRVEAMRLGHERVVGLTLEEDEERLMRIAIRESAAESRRAYEKKYGTEAERXXXXXXXXXXXXXAMAERESLQRDEEKQLMEVIKASL 222          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig597.14466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J997_9PHAE5.110e-8542.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRG7_ECTSI6.440e-6776.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 947..967
NoneNo IPR availableCOILSCoilCoilcoord: 922..942
NoneNo IPR availableCOILSCoilCoilcoord: 161..194
NoneNo IPR availableCOILSCoilCoilcoord: 641..671
IPR003903Ubiquitin interacting motifSMARTSM00726uimcoord: 669..688
e-value: 1300.0
score: 0.2
coord: 133..152
e-value: 270.0
score: 5.6
coord: 940..959
e-value: 0.32
score: 20.1
coord: 911..930
e-value: 290.0
score: 5.3
coord: 237..256
e-value: 5.9
score: 15.9
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 940..959
score: 10.251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig597contigL-elsbetiae_contig597:1638..11663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig597.14466.1mRNA_L-elsbetiae_contig597.14466.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig597 1609..12072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig597.14466.1 ID=prot_L-elsbetiae_contig597.14466.1|Name=mRNA_L-elsbetiae_contig597.14466.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=972bp
MNAGKPKASKPGGRRRAAGTVAAAAGVRFQGTIIEEDTWEAASKAARKKR
APKETRVRHSYVVRKPAAAPFWLSPGVQFGRSNCRGWFPTRQDWSAQGIP
QCVYVPLEPSTEDRVEAMRSGHERAVGLTMEEDEERLMRIAIRESAAESR
RAYEKKYGTEAEREARREAQAKARAKALAERESLERDEEKQLMEVIKASL
DISLGAGEKDDRDVIAAIETSKRENSANGHGGEEEQEEDPEILKAIAESR
RQHEAMQELLRAHGALPRAPDPAVAADASGVLTPEERTDQYATPGRGATL
PVAGETANMAASFANQPNPVVSAAAPPPPPPPPPPPPPPCPPPPQFAPPQ
TYAQERRTELLPTASESFPAPLTAAATPAGPTAERAHAGPVVGQVQAVPQ
DYRQGYQQSYRQDHRVEDNSGGMGGVHATPPPPPPPVYLPHTSTAGEMEP
PPGLQPPVAPATTAPGATPNPLTFGPGAGSSSRDEKSMQQTVMRTMQTQF
NADRLPSGGGGGGGGDGETGMMVNPATHASPLWEGGAAAPPPPPPPHATA
RVSPLASVTKTMPPQSLNYAGGAEPTTCASETPLKGGPQQSTPYHHQRVG
APQLAGWAVRTPAHGAAAAPVAAKGKPKPAWGAAGLASDGLTAEERELRE
VLEASREAEEAAAAAAAAEEERQMAAVLEASRVAEEARQRQEKEARVAVE
LALKRSIMAASAVTPYGTGYLGGNGNDGSLRPSPAQPPPQQHVGMGSDAL
RGAAEGAVWQGQQPPTTPRSNGAGYGAPVPPSRQPPPPPPPAGPVMASSS
DSSPACGGDGGVPGAYSTAGGVAARAPRPLALQRQAGAAATSTAVGAALA
EEEEDEDARELRIAMEEEIQFYGAKDTPTPSGGSGSVGAPAPARRAEAVD
HQHQQQQQQQRQRDELAWVLEQSRLEAELEKSRQAMAEEGEEEMLARVLE
ESRLDQEKRNAEELQLQRFIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003903UIM_dom