prot_L-elsbetiae_contig5967.14464.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5967.14464.1
Unique Nameprot_L-elsbetiae_contig5967.14464.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length364
Homology
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BLAST of mRNA_L-elsbetiae_contig5967.14464.1 vs. uniprot
Match: A0A6H5KGG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG9_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.860e-6
Identity = 88/331 (26.59%), Postives = 114/331 (34.44%), Query Frame = 0 
Query:    2 GPKTSNAGWYSGWSGMKTLKAKDLVSTNTKLRKHVFSLTPKGKELAGRMVKERSDDFGAFINNNSXXXXXXXXXXXXXXXXXXXXXSSNPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVPP-VQNPYAAXXXXXX------------------------SKTAAVHAFAAEARRSEDXXXXXXXXXXXXAISPVGASGTKRGRSMQ--------------------GRGAEKKAKS--------------NDTGGVGSPLLAGLQPCAGEEAGRSGV------------------ADGLVGLNDEMMTLTSLPAPVRPALTPSSP 255
            GP TS  G+Y GWS M +   K+ +    K R H F+LTP+G+E+A ++V+E  +DFG     NS                     SS+P                                 GVP  V+NPY+                               S  +A+ A AAEARRS +            A + VG   T RGR +Q                    GRG EK AK                D GG    LLA LQ C  +  G+S                    A  L  ++D+ M+LTS P    PAL  SSP
Sbjct:   25 GPLTSKNGYYCGWSSMSSTLEKNRLVDRHKGRPHTFTLTPEGREVAFKVVQEHPEDFGVSNAFNSTAHSDANSGGGAG--------SSSP--------------DAFSPPRRTGAEAAAAGTRGVPSSVRNPYSPSGWIAAAFPSSXXXXXXXXXXXXXXXRGGVSTASALAANAAEARRSVEVASKAKVKAPAAATASVG---TTRGRMLQRKYVMQRIVGMDLGSKGSGRGRGQEKHAKRAKLYEMSSPGPPRHGDRGGTSGMLLAALQQCGQQGDGKSAASRXXXXXXXXXXXXXXRGAGELGAIDDDWMSLTSKPVSSPPALEVSSP 330
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5967.14464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGG9_9PHAE1.860e-626.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5967contigL-elsbetiae_contig5967:2946..5532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5967.14464.1mRNA_L-elsbetiae_contig5967.14464.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5967 2944..5532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5967.14464.1 ID=prot_L-elsbetiae_contig5967.14464.1|Name=mRNA_L-elsbetiae_contig5967.14464.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=364bp
SGPKTSNAGWYSGWSGMKTLKAKDLVSTNTKLRKHVFSLTPKGKELAGRM
VKERSDDFGAFINNNSGSSNSSSNSNGNGSTNSNSRSSSNPFPPPPRRTG
AAGAASTASSGGSSVGRPPSSKKSGVPPVQNPYAAAAAASRSKTAAVHAF
AAEARRSEDSNGSKAKAAAAAAISPVGASGTKRGRSMQGRGAEKKAKSND
TGGVGSPLLAGLQPCAGEEAGRSGVADGLVGLNDEMMTLTSLPAPVRPAL
TPSSPSPRRGGATGNPRKAVPGPTPGSKARASGGGGSGVPSWTAASCAKP
RPAAVSVGGGDKSRRGEPTRGSGSNSSSNRSSNSGGGAAWAAVTPAVVVE
GVVDISLSDDDEDE
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