prot_L-elsbetiae_contig5947.14435.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5947.14435.1
Unique Nameprot_L-elsbetiae_contig5947.14435.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length61
Homology
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BLAST of mRNA_L-elsbetiae_contig5947.14435.1 vs. uniprot
Match: A0A6H5KS62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS62_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 9.090e-23
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0 
Query:    1 MGGWLMFYSFGVAKCLLDHGLHKVRPMQQSFIGSSAGSLAAAALALEADIDK 52
            MGGWLMFY+FGVAKCLLDHGLH VRP +QS IGSSAGSLAAAAL LEADIDK
Sbjct:  154 MGGWLMFYTFGVAKCLLDHGLHNVRPTEQSVIGSSAGSLAAAALVLEADIDK 205
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BLAST of mRNA_L-elsbetiae_contig5947.14435.1 vs. uniprot
Match: D7FRC4_ECTSI (PNPLA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC4_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.970e-21
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0 
Query:    1 MGGWLMFYSFGVAKCLLDHGLHKVRPMQQSFIGSSAGSLAAAALALEADIDK 52
            MGGWLMFY+FGVAKCLLDHGLH VRP +QS IGSSAGSLAAAAL LEADIDK
Sbjct:    1 MGGWLMFYTFGVAKCLLDHGLHNVRPTEQSVIGSSAGSLAAAALVLEADIDK 52
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BLAST of mRNA_L-elsbetiae_contig5947.14435.1 vs. uniprot
Match: A0A835ZCR0_9STRA (Acyl transferase/acyl hydrolase/lysophospholipase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR0_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 4.190e-12
Identity = 35/50 (70.00%), Postives = 38/50 (76.00%), Query Frame = 0 
Query:    2 GGWLMFYSFGVAKCLLDHGLHKVRPMQQSFIGSSAGSLAAAALALEADID 51
            GGWL FY FGVAKCL DHGLH V    Q FIGSSAG+L AA +AL+AD D
Sbjct:   24 GGWLQFYLFGVAKCLTDHGLHAVG-RSQKFIGSSAGALTAAGMALDADWD 72
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5947.14435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KS62_9PHAE9.090e-2388.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRC4_ECTSI1.970e-2188.46PNPLA domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZCR0_9STRA4.190e-1270.00Acyl transferase/acyl hydrolase/lysophospholipase ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1090.10coord: 2..57
e-value: 1.3E-5
score: 26.8
IPR002641Patatin-like phospholipase domainPFAMPF01734Patatincoord: 2..53
e-value: 3.1E-7
score: 30.8
IPR033562Patatin-like phospholipase domain-containing proteinPANTHERPTHR12406CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATEDcoord: 2..54
IPR016035Acyl transferase/acyl hydrolase/lysophospholipaseSUPERFAMILY52151FabD/lysophospholipase-likecoord: 2..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5947contigL-elsbetiae_contig5947:3062..3244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5947.14435.1mRNA_L-elsbetiae_contig5947.14435.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5947 3062..3244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5947.14435.1 ID=prot_L-elsbetiae_contig5947.14435.1|Name=mRNA_L-elsbetiae_contig5947.14435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=61bp
MGGWLMFYSFGVAKCLLDHGLHKVRPMQQSFIGSSAGSLAAAALALEADI
DKASASACFA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002641PNPLA_dom
IPR033562PLPL
IPR016035Acyl_Trfase/lysoPLipase