prot_L-elsbetiae_contig5943.14431.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5943.14431.1
Unique Nameprot_L-elsbetiae_contig5943.14431.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length123
Homology
BLAST of mRNA_L-elsbetiae_contig5943.14431.1 vs. uniprot
Match: A0A6H5JIE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIE3_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 7.410e-34
Identity = 62/114 (54.39%), Postives = 80/114 (70.18%), Query Frame = 0
Query:   13 ANLPPDLSECEALGWSRTSA--LDWALKERFSKRKGGNGD-CAHHQRILVQNPAIYYANLSTREKGAMKEAGQHAHAAECMRTTAAPGAILLFTDTCGWTLPRGMDAAQLGKVS 123
            AN P DLS CE L W+  ++  L+WA  +RF  R   +G+     QR+L+QNPA+YY+N S REKG M+EA Q  HAAECMRTTAAPG IL F D C + +P+G++AAQLG+ S
Sbjct:    7 ANAPTDLSTCEPLDWATDNSKDLEWAW-DRFLSRPSHSGEPWTRQQRVLLQNPALYYSNQSVREKGEMQEAQQWRHAAECMRTTAAPGTILFFRDVCNFRIPKGLNAAQLGRTS 119          
BLAST of mRNA_L-elsbetiae_contig5943.14431.1 vs. uniprot
Match: A0A6H5JCW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW4_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 3.840e-28
Identity = 58/115 (50.43%), Postives = 70/115 (60.87%), Query Frame = 0
Query:   13 ANLPPDLSECEAL-GWSRTSA---LDWALKERFSKRKGGNGDCAHHQRILVQNPAIYYANLSTREKGAMKEAGQHAHAAECMRTTAAPGAILLFTDTCGWTLPRGMDAAQLGKVS 123
            ANLPP LSECE +  W        + W+   RF       G   H QR L+QNPA YYAN S R+K  M+    HAHAA CMRT AAPG IL  T +CG+++P G+DA +LGKVS
Sbjct:    2 ANLPPVLSECEPIESWGADQPRQEIVWSWN-RFVAMGPRGGAWTHQQRRLLQNPAAYYANQSVRDKDDMQAPDMHAHAANCMRTFAAPGIILFLTQSCGFSMPHGLDAGELGKVS 115          
BLAST of mRNA_L-elsbetiae_contig5943.14431.1 vs. uniprot
Match: A0A6H5K062_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K062_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 2.380e-10
Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
Query:   77 MKEAGQHAHAAECMRTTAAPGAILLFTDTCGWTLPRGMDAAQLGKVS 123
            M+EA Q  HAAECMRTTAAPG IL F D C + +P+G++AAQLG+ S
Sbjct:    1 MQEAQQWRHAAECMRTTAAPGTILFFRDVCNFRIPKGLNAAQLGRTS 47          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5943.14431.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JIE3_9PHAE7.410e-3454.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCW4_9PHAE3.840e-2850.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K062_9PHAE2.380e-1063.83Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5943contigL-elsbetiae_contig5943:7664..8032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5943.14431.1mRNA_L-elsbetiae_contig5943.14431.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5943 7657..8032 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5943.14431.1 ID=prot_L-elsbetiae_contig5943.14431.1|Name=mRNA_L-elsbetiae_contig5943.14431.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=123bp
MANPATSPREKTANLPPDLSECEALGWSRTSALDWALKERFSKRKGGNGD
CAHHQRILVQNPAIYYANLSTREKGAMKEAGQHAHAAECMRTTAAPGAIL
LFTDTCGWTLPRGMDAAQLGKVS
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