prot_L-elsbetiae_contig5936.14419.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5936.14419.1
Unique Nameprot_L-elsbetiae_contig5936.14419.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length368
Homology
BLAST of mRNA_L-elsbetiae_contig5936.14419.1 vs. uniprot
Match: D7FJ99_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ99_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 7.000e-85
Identity = 190/375 (50.67%), Postives = 233/375 (62.13%), Query Frame = 0
Query:    1 VQLVTNVFRKTSSGWRLTRHHASDRDVAAATRGSEGTQILKAARKLPGGASSLLHNFVDKTGGMTELSTRLFRVVNGEMRPFDLDFSTDDXXXXXXXXXXXXXXXDITDQIGRDIATEMFLNFSDVHE-----ELAKEGXXXXXXXXXXAQDETIPPALRELMKERIKAAVHANLKNMGVEAN-PRLEKMYNVDDNGELKEVTQGSGSAAAGGKDVKEG-----EWGDLGSSG-----KEWSXXXXXXXXXXXXXXEKGEREDRERGGIATRQSRDLARKTVDAVRVLADMGRINGREKGMLLADVIRNASSAAPSATEAAYSLLLDGDVTPEGMEYTHRADEFAEQCRAITLRLEEQQNSNGRRWWKFWAKPQW 359
            VQLVTNVFRKTS+GWRLTRHH+SDRD+ A   G    Q LK AR+LPGG   +L NFVDKTGG+TE+S +LF VVNGEM+P D+D    DXXXXXXXXXXXXX  DITD IGR+IA+++FLN+ D+ +      L +            + DETIPPA+R+    RI+ A+ + +K    +A+  R E +YNV +   LKEV    G          E      EW D  +S      K WS              ++G+      G  A R SRDL RKTVDAVRVLA+MGRI   EK +LLADVIRN  S   S  E AYS+LLDG+VTPEGMEYT +A+EFA +C+AI  +L EQ NSN    W+FWAKPQW
Sbjct:  111 VQLVTNVFRKTSNGWRLTRHHSSDRDIIAGKGGRSAKQALKGARELPGGGG-ILQNFVDKTGGVTEVSAKLFSVVNGEMKPIDIDLDGSDXXXXXXXXXXXXX--DITDDIGREIASQIFLNYGDLFDGGDGASLGEISFSASGPMGGDSIDETIPPAMRK----RIEEAMESTMKKKRSDASRQRYENIYNVSEG--LKEVVAEGGGXXXXXXXXXETAKEWHEWQDAATSDSXXGDKGWSSFGG----------DEGKTGGDGEGEAALRGSRDLTRKTVDAVRVLAEMGRIGEGEKSLLLADVIRNVPSGGASKVEIAYSVLLDGEVTPEGMEYTDKAEEFAHECKAIAGQLLEQSNSNRPGRWRFWAKPQW 466          
BLAST of mRNA_L-elsbetiae_contig5936.14419.1 vs. uniprot
Match: A0A6H5KNS2_9PHAE (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS2_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 3.780e-80
Identity = 187/377 (49.60%), Postives = 231/377 (61.27%), Query Frame = 0
Query:    1 VQLVTNVFRKTSSGWRLTRHHASDRDVAAATRGSEGTQILKAARKLPGGASSLLHNFVDKTGGMTELSTRLFRVVNGEMRPFDLDFSTDDXXXXXXXXXXXXXXXDITDQIGRDIATEMFLNFSDVHE--------ELAKEGXXXXXXXXXXAQDETIPPALRELMKERIKAAVHANLKNMGVEAN-PRLEKMYNVDDNGELKEVTQGSGSAAAG---GKDVKEG-EWGDLGSS-----GKEWSXXXXXXXXXXXXXXEKGEREDRERGGIATRQSRDLARKTVDAVRVLADMGRINGREKGMLLADVIRNASSAAPSATEAAYSLLLDGDVTPEGMEYTHRADEFAEQCRAITLRLEEQQNSNGRRWWKFWAKPQW 359
            VQLVTN+FRKTS+GWRLTRHH+SDRD+ A   G    Q LK  R+LPGG   +L + VD TGG+TE+S +LF VVNGEM+P D+D       XXXXXXXXXXXXXDITD IGR+IA+++FLN++D+ +         L +            + DETIPPA+R+    RI+ A+ + +K    +A+  R E +YNV +   LKEV    G         +  KE  EW D  +S     GK WS                        G  A + SRDL RKTVDAVRVLA+MGRI   EK +LLADVIRNASS   S  E AYS+LLDG+VTPEGMEYT +A+EFA QC+AI  +L EQ NSN    W+FWAKPQW
Sbjct:  320 VQLVTNIFRKTSNGWRLTRHHSSDRDIIAGKGGRSAKQALKGVRELPGGGG-ILQSLVDNTGGVTEVSAKLFSVVNGEMKPIDIDLD----GXXXXXXXXXXXXXDITDDIGREIASQIFLNYADLFDGRDGGDGASLGEISFSASGPMGGDSIDETIPPAMRK----RIEEAMESTMKKKRSDASRQRYENIYNVSEG--LKEVVAEGGXXXXXXXXSETAKEWHEWQDAATSDSDDGGKGWSSFGGGEGKAGGDGD----------GEAALKGSRDLTRKTVDAVRVLAEMGRIGEEEKSLLLADVIRNASSDVASKVEIAYSVLLDGEVTPEGMEYTDKAEEFAHQCKAIAGQLLEQSNSNRPGRWRFWAKPQW 675          
BLAST of mRNA_L-elsbetiae_contig5936.14419.1 vs. uniprot
Match: A0A7S3XKZ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKZ2_HETAK)

HSP 1 Score: 53.5 bits (127), Expect = 2.800e-5
Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = 0
Query:  256 RQSRDLARKTVDAVRVLADMGRINGREKGMLLADVIRNASSAAPSATEAAYSLLLDGDVTPEGMEYTHRADEFAEQCRAI 335
            +Q  + A++TV A+R +A  GR+N +EK +LLA++IR+ S+   S  E +Y LLL+         +    D+FA+QC+ I
Sbjct:   41 KQDTERAKRTVIALRKVAREGRVNEKEKQILLAELIRSTSAKKLSHLEISYELLLEQADYQNIERFEEALDDFADQCKTI 120          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5936.14419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJ99_ECTSI7.000e-8550.67SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KNS2_9PHAE3.780e-8049.60SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S3XKZ2_HETAK2.800e-537.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 1..37
e-value: 3.2E-5
score: 25.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5936contigL-elsbetiae_contig5936:479..11129 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5936.14419.1mRNA_L-elsbetiae_contig5936.14419.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5936 479..11129 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5936.14419.1 ID=prot_L-elsbetiae_contig5936.14419.1|Name=mRNA_L-elsbetiae_contig5936.14419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=368bp
VQLVTNVFRKTSSGWRLTRHHASDRDVAAATRGSEGTQILKAARKLPGGA
SSLLHNFVDKTGGMTELSTRLFRVVNGEMRPFDLDFSTDDDDDDDDDDDE
DEEEEDITDQIGRDIATEMFLNFSDVHEELAKEGGGGEGGGGGGAQDETI
PPALRELMKERIKAAVHANLKNMGVEANPRLEKMYNVDDNGELKEVTQGS
GSAAAGGKDVKEGEWGDLGSSGKEWSTTSGSGGSSGGGGREKGEREDRER
GGIATRQSRDLARKTVDAVRVLADMGRINGREKGMLLADVIRNASSAAPS
ATEAAYSLLLDGDVTPEGMEYTHRADEFAEQCRAITLRLEEQQNSNGRRW
WKFWAKPQWRRFWTGEG*
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