prot_L-elsbetiae_contig5923.14397.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5923.14397.1
Unique Nameprot_L-elsbetiae_contig5923.14397.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length323
Homology
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BLAST of mRNA_L-elsbetiae_contig5923.14397.1 vs. uniprot
Match: D7FV49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV49_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 2.220e-63
Identity = 142/238 (59.66%), Postives = 166/238 (69.75%), Query Frame = 0 
Query:    1 MVDVPDTGATLGAAFSKALLRLEGFSGEVAARIFAAAEAFEGGSGKTASRLCER-GGCRARVEGARRLVRAAADVVDAVRARNFVLSLLDFEGVQEAIVEAGGWSRVESWASALKKLRGSADVDAPLTLLSDVEELKDWLRCESSWRHAAEGAEEGLRRLLDLRPLREVVERARQRWMCPEAYQLLRQDVLEA-QERFEFPEVKKAAALVEAXXXXXXXXXXAAETVKTGGKRKPGRK 236
            +VDV +T ATLGA+FSKAL RLEGFS E+A  + +AAEAF   +    +RL ER GGC ARVE A RL+ A ADVVDAVRAR FVLSLL+ EGV+EAIVEAGGW  VE WAS+LK L+G AD+D PLTLLSDV   K WL  + +W HA   AE  LR LL+LR LR  VERARQRWMCPEAYQ LRQ++LEA  +RF FPE+KK      A          AA   ++ GK KP +K
Sbjct: 1688 VVDVSETDATLGASFSKALFRLEGFSCEMAVEVLSAAEAF---AAADQTRLAERDGGCPARVESAGRLLSATADVVDAVRARKFVLSLLELEGVEEAIVEAGGWGNVEMWASSLKGLKGCADIDEPLTLLSDVGAFKAWLMSKPTWGHAT--AEGILRSLLELRALRGRVERARQRWMCPEAYQALRQEILEAAHDRFRFPELKKKEGKAAADGRVE-----AAVVEQSAGKGKPVKK 1915
[Close]
BLAST of mRNA_L-elsbetiae_contig5923.14397.1 vs. uniprot
Match: A0A6H5JEK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK1_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 5.220e-26
Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 0 
Query:  115 KLRGSADVDAPLTLLSDVEELKDWLRCESSWRHAAEGAEEGLRRLLDLRPLREVVERARQRWMCPEAYQLLRQDVLEA-QERFEFPEVKK 203
            +L+G AD+D PLTLLSDV   K WLR E +W HAAE AE  LR LL+L  LR +VERARQRWMCPEAYQ LRQ++LEA  +RF FPE+KK
Sbjct:    3 RLKGCADIDEPLTLLSDVGAFKAWLRSEPTWGHAAETAEGILRSLLELPVLRGLVERARQRWMCPEAYQALRQEILEAAHDRFRFPELKK 92
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5923.14397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FV49_ECTSI2.220e-6359.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEK1_9PHAE5.220e-2666.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5923contigL-elsbetiae_contig5923:3360..10244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5923.14397.1mRNA_L-elsbetiae_contig5923.14397.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5923 2359..10255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5923.14397.1 ID=prot_L-elsbetiae_contig5923.14397.1|Name=mRNA_L-elsbetiae_contig5923.14397.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=323bp
MVDVPDTGATLGAAFSKALLRLEGFSGEVAARIFAAAEAFEGGSGKTASR
LCERGGCRARVEGARRLVRAAADVVDAVRARNFVLSLLDFEGVQEAIVEA
GGWSRVESWASALKKLRGSADVDAPLTLLSDVEELKDWLRCESSWRHAAE
GAEEGLRRLLDLRPLREVVERARQRWMCPEAYQLLRQDVLEAQERFEFPE
VKKAAALVEAEAEAEAALALAAETVKTGGKRKPGRKKASASAASSKSGKK
SDDGNAGGGKRPGSAANGGKQGTVCSSALSSDAIPRIDLASDPATSEKAG
AADDGTAKPKPKSKRKRRSSMA*
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