prot_L-elsbetiae_contig5908.14384.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5908.14384.1
Unique Nameprot_L-elsbetiae_contig5908.14384.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length172
Homology
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: D8LM03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM03_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 5.740e-89
Identity = 133/172 (77.33%), Postives = 146/172 (84.88%), Query Frame = 0
Query:    1 MDQPSWMQNTGQAEAA-GXXXXXXXXXXXAASESGDATIIRSVFHFVNIGVSIMMAASAAFGLISFSSFENVILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFLNFPLDQSLSEWTGFVTLGWGVLTVIAYMTRPEWFEIPKPAQNLSV 171
            MDQPSWMQNTGQA A  G           A S SGDAT++RSVFHFVNIGV++MMAASAAFGLI F +FENV+LSVYLM+FA+LLFMYE VRVM +CER KQ MTKNFGFFFGAKGRGLYL+FVGFLNFPLD +LS WTG VTLGWGVLTV+AYMTRPEWFE+PKPAQN SV
Sbjct:    1 MDQPSWMQNTGQAAAPPGTSSGGAPAQQNAGSRSGDATVVRSVFHFVNIGVAVMMAASAAFGLIDFRNFENVVLSVYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLTLSFWTGVVTLGWGVLTVLAYMTRPEWFEVPKPAQNTSV 172          
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: A0A836CK83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK83_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.190e-34
Identity = 79/170 (46.47%), Postives = 105/170 (61.76%), Query Frame = 0
Query:    1 MDQPSWMQN--TGQAEAAGXXXXXXXXXXXAASESGDAT--IIRSVFHFVNIGVSIMMAASAAFGLISFSSFENV--ILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFLNFPLDQSLSEWTGFVTLGWGVLTVIAYMTRPEWFEIPK 164
            MDQPSWMQ+  TG A AA            AA +SG +T  I+R+ FHFVNIG+ ++MA SA  G+I  ++ + V   L VYL  FA+LLF YE++R + +     + M +NFG+F+G  GRG YLIFVGFLNF L  ++   TG V LGWG L +     +PEWF + K
Sbjct:    1 MDQPSWMQDGATGGAPAA---PAAASTRPAAAVDSGGSTGAIVRNGFHFVNIGLCVLMAFSAVLGVIEITNAQVVDFFLGVYLFFFAVLLFSYEVLRWVPNAN-LDEMMRRNFGWFYGNMGRGFYLIFVGFLNFGLHGTVPLATGIVCLGWGALCIAVGFYKPEWFAVEK 166          
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: B5YNL0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNL0_THAPS)

HSP 1 Score: 72.4 bits (176), Expect = 1.590e-12
Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 0
Query:   34 GDATIIRSVFHFVNIGVSIMMAASAAFGLISF-SSFENVILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFLNFPLDQSLS----EW-TGFVTLGWGVLTVIAYMTRPE 158
            G A  I+ +F   +I +S +M     FG+I   +S   + +SVY++LFA LLF++EL+    S +   + +  NFGF +G KG+  YLIFV FL   L   +S     W TG   LG G+L +  + T+PE
Sbjct:   53 GKANCIQRLFSLWDICLSALMCCLGVFGIIDNPTSLPEIFVSVYMILFATLLFLFELMW-WKSIDSVNKNLRMNFGFLYGIKGKAAYLIFVAFLAIGLRDDVSVKFLRWMTGGCFLGTGILLLFLHFTKPE 182          
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: A0A7S0GII7_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GII7_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.760e-12
Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 0
Query:   36 ATIIRSVFHFVNIGVSIMMAASAAFGLISFS-----SFENVILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFLNFPLDQSLSE------------WTGFVTLGWGVLTVIAYMTRPEWFEIPK 164
            A  ++ +     +G+  MM   A FGLISF      S+ +  +S+Y+++FA LL  YEL    +S     +++ KNFGF +G +G+ L++IFV FL F L+Q  +E             TG      GVL +  Y  +P+  E  K
Sbjct:   49 AGCVQKILSLFVVGIGSMMMVLAIFGLISFKWEKAVSYSDAFVSIYMIIFATLLLAYELTW-WASTAFVNKSLRKNFGFLYGIRGKSLFIIFVAFLTFGLEQQTNEVIYGVSLKMLGLGTGISFFAVGVLHLTLYFLKPDLLESYK 193          
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: A0A7S2UC71_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UC71_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.140e-10
Identity = 45/131 (34.35%), Postives = 72/131 (54.96%), Query Frame = 0
Query:   38 IIRSVFHFVNIGVSIMMAASAAFGLISFSS-----FENVILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFLNFPL-DQSLS---EW-TGFVTLGWGVLTVIAYMTRPE 158
            +I  +   +NIG+S MM A    G++ F       + +  ++ Y+++FA+LLF YE +    +     Q++ KNFGF +G KG+GLYLIF+ FL   L D+S +   +W TG   +  G L +     +PE
Sbjct:   32 LILVLMSMLNIGLSAMMVALGVLGILDFDGKGVEDYSDAFIAGYMIVFAVLLFAYECMW-WKAIGPINQSLRKNFGFMYGLKGKGLYLIFISFLTIGLSDESENVELQWATGISYMAAGFLHLFVVFAKPE 161          
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: A0A7S1GLT3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GLT3_CYCTE)

HSP 1 Score: 66.6 bits (161), Expect = 1.890e-10
Identity = 44/126 (34.92%), Postives = 74/126 (58.73%), Query Frame = 0
Query:   46 VNIGVSIMMAASAAFGLISFSSF-----ENVILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFL-----NFPLDQSLSEWTGFVTLGWGVLTVIAYMTRPEWFE 161
            ++IG+S++MA+     ++SF +F         L+ Y+++FA+LLF YE++   S+     +++ KNFGF +G +G+GLYLIFV FL     + P   +++  TG   L  GVL ++    +PE  E
Sbjct:   54 IDIGLSLLMASLGVLTILSFKTFAARDISEGFLAGYMIIFALLLFAYEIMW-WSAIPSINKSLRKNFGFLYGLRGKGLYLIFVAFLCLGLGSDPAVTAVTYATGIAFLTVGVLHLLVAFCQPEVSE 178          
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: B7G112_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G112_PHATC)

HSP 1 Score: 66.6 bits (161), Expect = 2.150e-10
Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 0
Query:   41 SVFHFVNIGVSIMMAASAAFGLISF-----SSFENVILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFLNFPL-DQSLS-----EW-TGFVTLGWGVLTVIAYMTRPEWFEIPKP 165
            S+  F+N G++ MM       LI F     S +    LS Y+++FA++LF+YEL+   +      +    NFGF +G +G+GL+L+F+ FL   L D++ S     +W TG   LG G   +  +MT  E     KP
Sbjct:   51 SLLSFLNFGLAAMMGTLGVLSLIHFNPGSSSDYSAAFLSSYMVIFAVILFLYELIW-WTPIAALNKMFRMNFGFMYGLRGKGLFLVFIAFLCLGLRDENASGVKGLDWATGLAWLGAGCFNIFIWMTWSEASAAYKP 186          
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: A0A7S4A8Z0_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8Z0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.850e-10
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 0
Query:   34 GDATIIRSVFHFVNIGVSIMMAASAAFGLIS-----FSSFENVILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFLNFPLDQS-----LSEWTGFVTLGWGVLTVIAYMTRPE 158
            G +  +  +    NIG++ +M       +I       +      L+ Y++LFA+LLF+YEL+   S  ++  + M KNFGF +G +G+GLYLIFV FL F L +      L+  TG   L  G+L +     RPE
Sbjct:   41 GKSNCLLGLLSVFNIGLAALMTVLGVLTIIQVHLTGINDLSEPFLAFYMILFAVLLFLYELMW-WSPMKKLNKDMRKNFGFMYGLRGKGLYLIFVAFLCFGLGKDAKVAILNYCTGASFLAGGLLHMFVIFFRPE 174          
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: A0A7S2YMD7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMD7_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 8.320e-10
Identity = 45/148 (30.41%), Postives = 72/148 (48.65%), Query Frame = 0
Query:   29 AASESGDATIIRSVFHFVNIGVSIMMAASAAFGLI----SFSSFENVILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFLNFPLDQSLS------EW-TGFVTLGWGVLTVIAYMTRPEWFEIPKP 165
            A+    +A +      F+NIG+S  M A      I    S     +++L +Y+ +FA +LF+YEL           ++  KNFGF +G   +G YLIF+ FL   L  S +      +W TG   L +GV+ +   +T PE  ++ +P
Sbjct:   40 ASKSRRNARVFLVFLSFLNIGLSAAMGALGILSCINTTASIDDLTDMMLGIYMAIFAFILFIYELCW-WQPIPAINRSFRKNFGFMYGLNSKGFYLIFIAFLTLGLTDSNNSGVDGLDWVTGIGWLAFGVIHIAVALTWPETVDVYRP 186          
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Match: A0A7S2W1J8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W1J8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 9.440e-10
Identity = 49/143 (34.27%), Postives = 73/143 (51.05%), Query Frame = 0
Query:   29 AASESGDATIIRSVFHFVNIGVSIMMAASAAFGLISF---SSFEN---VILSVYLMLFAILLFMYELVRVMSSCERAKQAMTKNFGFFFGAKGRGLYLIFVGFLNFPLDQSLSEW----TGFVTLGWGVLTVIAYMTRPEWFE 161
            +++    AT+ + +       +++ M A    G +S    SS  N   V +  Y+++F++LLF YEL+  +S      + + KNFGF +G KG+GLYLIFV FL   LD    EW    TG   L  G+L +     RPE  E
Sbjct:   39 SSNSKNRATLTQRLLSIFCCLLAVCMCALGVLGFLSSLKSSSIVNASEVFICFYMVMFSLLLFTYELMWWIS-VPTINRIVRKNFGFMYGFKGKGLYLIFVAFLCVGLDNGGEEWLRYFTGVAFLSGGILHLFLVCFRPEIVE 180          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5908.14384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LM03_ECTSI5.740e-8977.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CK83_9STRA1.190e-3446.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B5YNL0_THAPS1.590e-1237.40Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S0GII7_9STRA1.760e-1232.88Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2UC71_9STRA1.140e-1034.35Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1GLT3_CYCTE1.890e-1034.92Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B7G112_PHATC2.150e-1033.58Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4A8Z0_9STRA2.850e-1034.07Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S2YMD7_9STRA8.320e-1030.41Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S2W1J8_9STRA9.440e-1034.27Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 42..127
e-value: 5.6E-9
score: 36.1
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 30..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 88..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 43..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5908contigL-elsbetiae_contig5908:6419..11329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5908.14384.1mRNA_L-elsbetiae_contig5908.14384.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5908 6419..11399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5908.14384.1 ID=prot_L-elsbetiae_contig5908.14384.1|Name=mRNA_L-elsbetiae_contig5908.14384.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
MDQPSWMQNTGQAEAAGGGAGGASTQQSAASESGDATIIRSVFHFVNIGV
SIMMAASAAFGLISFSSFENVILSVYLMLFAILLFMYELVRVMSSCERAK
QAMTKNFGFFFGAKGRGLYLIFVGFLNFPLDQSLSEWTGFVTLGWGVLTV
IAYMTRPEWFEIPKPAQNLSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15