prot_L-elsbetiae_contig5905.14378.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5905.14378.1
Unique Name	prot_L-elsbetiae_contig5905.14378.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	161

Homology

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: D8LBL7_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBL7_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 2.060e-106
Identity = 157/160 (98.12%), Postives = 159/160 (99.38%), Query Frame = 0

Query:    1 MINFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAANGNQGPSRRR 160
            MINF+LLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARA KMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMD+LMEEAKEEAANGNQGPSRRR
Sbjct:    1 MINFLLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARALKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDDLMEEAKEEAANGNQGPSRRR 160

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: A0A7S4A8C4_9STRA (AP complex subunit sigma n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8C4_9STRA)

HSP 1 Score: 265 bits (676), Expect = 9.990e-89
Identity = 130/160 (81.25%), Postives = 149/160 (93.12%), Query Frame = 0

Query:    1 MINFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE-AANGNQGPSRR 159
            MINF+LL+SRQGKTRLTKWY++Y+AKEKAR VREITSTVLARAPKMCNFVEWR+KKI+YKRYASLFF+ C+D +DNELITLE IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDE+F+GGEL ESSKKEVL VC+QMDELMEE +E+ AA+G+ G  R+
Sbjct:    1 MINFLLLVSRQGKTRLTKWYESYAAKEKARIVREITSTVLARAPKMCNFVEWRNKKIIYKRYASLFFIVCVDAEDNELITLEMIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDEIFVGGELCESSKKEVLSVCAQMDELMEEREEDKAASGSSGRVRK 160

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: A0A835Z7C9_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7C9_9STRA)

HSP 1 Score: 262 bits (669), Expect = 9.190e-88
Identity = 124/151 (82.12%), Postives = 144/151 (95.36%), Query Frame = 0

Query:    1 MINFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAAN 151
            M+NF+LL+SRQGKTRLTKWY+ Y++KEKAR VREIT+ VLAR PKMCNF+EWRDKKIVYKRYASLFFVAC+D+DDNELITLE+IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVC Q+D+LME+ +++ ++
Sbjct:    1 MLNFLLLVSRQGKTRLTKWYEAYTSKEKARIVREITTLVLARPPKMCNFLEWRDKKIVYKRYASLFFVACVDRDDNELITLEQIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCGQIDDLMEDVRDDGSS 151

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: A0A7S2SD76_9STRA (AP complex subunit sigma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD76_9STRA)

HSP 1 Score: 259 bits (661), Expect = 3.100e-86
Identity = 124/153 (81.05%), Postives = 143/153 (93.46%), Query Frame = 0

Query:    1 MINFMLLISRQGKTRLTKWYQTY-SAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAANG 152
            MINFMLLISRQGKTRLTKWY++Y S KEKAR VREIT+ VL+R PK+CNF+EWRDKK++YKRYASLFFVAC+D++DNEL+TLE IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDELFI GELQESSKKEVL VC+QMDE+M+E+K+E  +G
Sbjct:   14 MINFMLLISRQGKTRLTKWYESYGSTKEKARIVREITAMVLSRPPKLCNFIEWRDKKVIYKRYASLFFVACVDKEDNELVTLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFINGELQESSKKEVLSVCAQMDEMMDESKDEGTSG 166

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: A0A7S2XUT6_9STRA (AP complex subunit sigma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUT6_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.380e-85
Identity = 124/151 (82.12%), Postives = 136/151 (90.07%), Query Frame = 0

Query:    1 MINFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAAN 151
            MINFMLLISRQGKTRLTKWY +Y  KEKAR +REITS VL R PKMCNF+EW+DKKIVYKRYASLFFV CID+ DNELITLE IHL+VEVLDRYFGNVCELDIIFNFHKAYYILDELFI GELQES K+EVLR+C QMD++MEE KE+ +N
Sbjct:    1 MINFMLLISRQGKTRLTKWYDSYGTKEKARIMREITSMVLNRPPKMCNFIEWKDKKIVYKRYASLFFVVCIDKGDNELITLEMIHLYVEVLDRYFGNVCELDIIFNFHKAYYILDELFIAGELQESGKREVLRICGQMDDMMEEGKEDVSN 151

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: W7T3W8_9STRA (AP complex subunit sigma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3W8_9STRA)

HSP 1 Score: 256 bits (653), Expect = 3.310e-85
Identity = 121/148 (81.76%), Postives = 137/148 (92.57%), Query Frame = 0

Query:    1 MINFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE 148
            MINF+LL+SRQGKTRL+KWY+ Y+ KEKAR +RE+T+ VLARAPKMCNF+EWRDKK++YKRYASLFF+A +D  DNELITLE IHLFVE+LDRYFGNVCELDIIFNFHKAYYILDELFIGG LQESSK EVLRVCSQMDELMEE K++
Sbjct:    1 MINFLLLVSRQGKTRLSKWYKHYTTKEKARAIRELTNLVLARAPKMCNFIEWRDKKVIYKRYASLFFIAAVDSSDNELITLEMIHLFVEILDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQESSKNEVLRVCSQMDELMEEQKDD 148

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: A0A7S3LZF2_9STRA (AP complex subunit sigma n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZF2_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.360e-81
Identity = 116/148 (78.38%), Postives = 138/148 (93.24%), Query Frame = 0

Query:    1 MINFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE 148
            MINF+LL+SRQGKTRL+KW+   +AKEK R VRE+T+TVL+R PKMCNF+EW+DKK++YKRYASLFFVAC+D++DNELI LE+IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGG LQE+SK EVLR+C+ MDE+M+E+KEE
Sbjct:   18 MINFILLVSRQGKTRLSKWFVQMTAKEKTRAVRELTATVLSRPPKMCNFIEWQDKKVIYKRYASLFFVACVDKNDNELIVLEQIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGHLQETSKVEVLRICAAMDEMMDESKEE 165

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: F0Y8T1_AURAN (AP complex subunit sigma n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8T1_AURAN)

HSP 1 Score: 242 bits (617), Expect = 1.610e-79
Identity = 128/176 (72.73%), Postives = 142/176 (80.68%), Query Frame = 0

Query:    1 MINFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWR-DKKIVYKRYASLFFVAC--------------------IDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAANGNQG 155
            MINFMLL+SRQGKTRLTKWY++YS KEKAR VRE  +TVLARAPKMCNF+EWR DKKIVYKRYASLFF+ C                    +D +DNELITLE IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFI GEL+ESSKKEVL +C+QMDE+M+E+KEE  NG  G
Sbjct:    1 MINFMLLVSRQGKTRLTKWYESYSTKEKARIVRE--ATVLARAPKMCNFIEWRADKKIVYKRYASLFFICCGDRRRERAPRRRKLKFLPAGVDSEDNELITLEMIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIAGELEESSKKEVLSICAQMDEMMDESKEEG-NGKGG 173

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: A0A812YG65_SYMMI (AP complex subunit sigma (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YG65_SYMMI)

HSP 1 Score: 241 bits (615), Expect = 2.330e-79
Identity = 112/147 (76.19%), Postives = 135/147 (91.84%), Query Frame = 0

Query:    2 INFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE 148
            INF+LL+SRQGKTRLTKW+     K+K R+VRE+T  VL+R PK+CNF+EWRDKK+VYKRYASL+F+AC+D++DNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYI+DELFIGG LQE+SK EVLR+C+ MDE+M+E+K+E
Sbjct:    1 INFILLVSRQGKTRLTKWFVQKEPKDKTRSVRELTGMVLSRPPKLCNFLEWRDKKVVYKRYASLYFIACVDKEDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYIMDELFIGGYLQETSKAEVLRICAAMDEMMDESKDE 147

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BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Match: A0A024THD2_9STRA (AP complex subunit sigma n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024THD2_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.050e-76
Identity = 111/148 (75.00%), Postives = 130/148 (87.84%), Query Frame = 0

Query:    1 MINFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFVEWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEE 148
            MI+FMLL+SRQGKTRL+KWY T   K+KAR +RE+T+ VL R  K CNF+EW+D+KIVYKRYASL+FVACI +++NELITLE IHLFVEVLDRYFGNVCELDIIFNFHKAYYILDEL IGG LQE SKKE+LRVC Q ++ MEE+KE+
Sbjct:    1 MIDFMLLVSRQGKTRLSKWYSTVPLKDKARIIREVTTLVLGRPQKQCNFIEWKDQKIVYKRYASLYFVACISKEENELITLEVIHLFVEVLDRYFGNVCELDIIFNFHKAYYILDELLIGGNLQEPSKKEILRVCQQQEDFMEESKED 148

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5905.14378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBL7_ECTSI	2.060e-106	98.13	AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=...	[more]
A0A7S4A8C4_9STRA	9.990e-89	81.25	AP complex subunit sigma n=1 Tax=Pelagomonas calce...	[more]
A0A835Z7C9_9STRA	9.190e-88	82.12	AP complex subunit sigma n=1 Tax=Tribonema minus T...	[more]
A0A7S2SD76_9STRA	3.100e-86	81.05	AP complex subunit sigma n=1 Tax=Rhizochromulina m...	[more]
A0A7S2XUT6_9STRA	1.380e-85	82.12	AP complex subunit sigma n=1 Tax=Fibrocapsa japoni...	[more]
W7T3W8_9STRA	3.310e-85	81.76	AP complex subunit sigma n=2 Tax=Monodopsidaceae T...	[more]
A0A7S3LZF2_9STRA	1.360e-81	78.38	AP complex subunit sigma n=1 Tax=Spumella elongata...	[more]
F0Y8T1_AURAN	1.610e-79	72.73	AP complex subunit sigma n=1 Tax=Aureococcus anoph...	[more]
A0A812YG65_SYMMI	2.330e-79	76.19	AP complex subunit sigma (Fragment) n=1 Tax=Symbio...	[more]
A0A024THD2_9STRA	2.050e-76	75.00	AP complex subunit sigma n=12 Tax=Saprolegniaceae ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..148
None	No IPR available	GENE3D	3.30.450.60		coord: 1..154 e-value: 2.7E-63 score: 214.3
None	No IPR available	PANTHER	PTHR11753:SF5	AP COMPLEX SUBUNIT SIGMA	coord: 2..151
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..140 e-value: 9.4E-57 score: 190.9
IPR016635	Adaptor protein complex, sigma subunit	PIRSF	PIRSF015588	AP_complex_sigma	coord: 1..152 e-value: 6.1E-69 score: 228.7
IPR016635	Adaptor protein complex, sigma subunit	PANTHER	PTHR11753	CLATHRIN COAT ASSEMBLY PROTEIN	coord: 2..151
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5905	contig	L-elsbetiae_contig5905:5780..9167 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5905.14378.1	mRNA_L-elsbetiae_contig5905.14378.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5905 5659..9288 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5905.14378.1 ID=prot_L-elsbetiae_contig5905.14378.1|Name=mRNA_L-elsbetiae_contig5905.14378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=161bp
MINFMLLISRQGKTRLTKWYQTYSAKEKARTVREITSTVLARAPKMCNFV
EWRDKKIVYKRYASLFFVACIDQDDNELITLEKIHLFVEVLDRYFGNVCE
LDIIFNFHKAYYILDELFIGGELQESSKKEVLRVCSQMDELMEEAKEEAA
NGNQGPSRRR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022775	AP_mu_sigma_su
IPR016635	AP_complex_ssu
IPR011012	Longin-like_dom_sf