prot_L-elsbetiae_contig586.14323.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig586.14323.1
Unique Name	prot_L-elsbetiae_contig586.14323.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	249

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig586.14323.1 vs. uniprot
Match: D8LBT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT6_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.180e-70
Identity = 150/242 (61.98%), Postives = 185/242 (76.45%), Query Frame = 0

Query:    7 SCRRDVRDLRRQCQRLSQGNEELKSSADAARVEACASKRRAAAAEQELEAERKVGAQLRRIRDTLQVAAASDKKSIARLQAELCKGALSSRLLDRARCLKQAVEKLEGRSNAQALALSAKTAELEGSRREARAIAVALGARTGTPSPGCGFNKRPVTVDELMEIGRAKLMNHDLALEMSRLSETSETLATEKQELEERLSQESAEVKRSRAEAAKARGMFERXXXXXXXXXXXASKANASAR 248
            SCRR+VR+LR QC++LS  N+ELK +ADA R EACAS+RRA AA++ELEAERK G  LRR+RD LQVAAA+D+KSI RLQ +LCKG+ SSRLLD+ARCLK+ VE+LE +S  QA ALSAKTAELE SRREARA+A ALG R    S   G    PVTVDEL+E+GRAKLMNHDLAL M+RLSE S  LA+EKQELE+ L +++AE++R +A+  + +G  ER           A++ANAS R
Sbjct:    9 SCRREVRELRLQCRKLSSSNDELKLAADARRKEACASRRRADAAQKELEAERKSGVVLRRVRDALQVAAAADRKSIDRLQGQLCKGSPSSRLLDKARCLKRTVEELESKSTEQAEALSAKTAELEASRREARALAAALGVRAEKASLA-GVATGPVTVDELLEVGRAKLMNHDLALGMARLSEASGVLASEKQELEDLLVKKTAEIERCKAQTTEVQGELERERKVADGHRAAAAEANASTR 249

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig586.14323.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig586.14323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LBT6_ECTSI	1.180e-70	61.98	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 12..32
None	No IPR available	COILS	Coil	Coil	coord: 184..218
None	No IPR available	COILS	Coil	Coil	coord: 95..115
None	No IPR available	COILS	Coil	Coil	coord: 228..248

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig586	contig	L-elsbetiae_contig586:18765..23738 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig586.14323.1	mRNA_L-elsbetiae_contig586.14323.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig586 18648..23738 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig586.14323.1 ID=prot_L-elsbetiae_contig586.14323.1|Name=mRNA_L-elsbetiae_contig586.14323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
MAEADASCRRDVRDLRRQCQRLSQGNEELKSSADAARVEACASKRRAAAA
EQELEAERKVGAQLRRIRDTLQVAAASDKKSIARLQAELCKGALSSRLLD
RARCLKQAVEKLEGRSNAQALALSAKTAELEGSRREARAIAVALGARTGT
PSPGCGFNKRPVTVDELMEIGRAKLMNHDLALEMSRLSETSETLATEKQE
LEERLSQESAEVKRSRAEAAKARGMFERERTEADEQRAEASKANASARR