prot_L-elsbetiae_contig5852.14310.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5852.14310.1
Unique Nameprot_L-elsbetiae_contig5852.14310.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length539
Homology
BLAST of mRNA_L-elsbetiae_contig5852.14310.1 vs. uniprot
Match: A0A6H5L9A3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9A3_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 1.990e-100
Identity = 236/547 (43.14%), Postives = 304/547 (55.58%), Query Frame = 0
Query:    9 SLASLHDAARKGDSRSLQRLISIIDPAAAQKVAAVLLQRDNRKPAAGAPPSPSKKVVKEPRKATDGPQTRVARARRGPGKQTLASPLARLLQKQDTKRRTALYVACAAGNTDVADTLLAVGASSEGHGAWQRTPLHIAAYEAHTSAIRSLLGAGADPWAVNGRGQTPSDVSFLYNANGKVLELLEQAINMRRVIFTGTGGLVGATFVHDNGQVGDVTAVTEQWSFTLEVKLDRWKMGNRSGARVYLPVRGQQHHTSTRSSSDDLTAPTGHSKADSAHPRPKPCEQSIPWSAKTVGRMRLESDGLLKVNADSLVGARANTR--VGRGAVISVRDVSIRCEVETVRVNNAETIEGVTTES-------RKA----TYDRTGDGANFDAGEGHRTLLAKDARTCQH-SRTPEYDSCAPSVVDGGPTIPESPCVD-GSNRRRDGHGGHSEDGAEAPGRVKRQEEECCKHEAPSPTVS-ERCLNERIIHVASREGAPGDCGAYHRVGDCGRRRSGDDDEDDVKSDAWDGCSVGTERAAEFDEWAATTAMERTR 539
            SL SLH+AAR+ DS SLQRLI+ IDP AA K+ AVL   D+R     +P +P+     + ++ T    TR         ++   S L RLLQ+QD+KRRT L+VACA+GNT++AD LL VGAS +GHGAWQRTPLHIAA+E HTSA+R LLGAGADPWA+N RGQTPS+VS ++NAN + L LLE+A  MRR + TGT GL+G TFVHD+GQVG V    E+W+FTLEV LD WKMGN SG ++YLPV        +RS+      P                   IP  A TV RMRLES+ L+ V ADSL+GAR + R  +G G V +VR+V IRC++ T     + T  G+TT +       R+A    +  R+ +    D GE    +  ++A+ C+  S T         V++ G T         G   R  G  G     + A  R         +  APS   S  RCL+ R++ VAS  G            +      GD D++    D W   SVGTE AAE D   ATT  ERTR
Sbjct:   11 SLTSLHNAARREDSASLQRLIATIDPLAADKIGAVLQDGDSRGACISSPRTPA--AAPKNKEHTRCLSTRWP-------EEKAPSRLKRLLQQQDSKRRTVLFVACASGNTEIADALLTVGASLDGHGAWQRTPLHIAAFEGHTSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAAERWTFTLEVDLDGWKMGNGSGVKLYLPV--------SRSNPTSFAEP-------------------IPRLADTVQRMRLESEDLVNVTADSLIGARVSRRTPLGGGRVTAVRNVKIRCDLRTAA---SSTRAGLTTATATGSKRERRANATLSETRSEEPDLSDRGESL-GMPMQEAQPCRSFSTTSSGHYVGLKVLEVGLTAGLGAVGHHGDRERHQGEDGPKATNSCATPRGPENAVHGHRQVAPSGECSTRRCLSTRLVQVASNHGVSRRQLEQWPPSEGSWANDGDTDDESGAPDDW---SVGTESAAELDACVATTVNERTR 514          
BLAST of mRNA_L-elsbetiae_contig5852.14310.1 vs. uniprot
Match: D7FIG7_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG7_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 3.550e-77
Identity = 144/250 (57.60%), Postives = 179/250 (71.60%), Query Frame = 0
Query:    9 SLASLHDAARKGDSRSLQRLISIIDPAAAQKVAAVLLQRDNRKPAAGAPPSPSKKVVKEPRKATDGPQTRV--ARARRGPGKQTLASPLARLLQKQDTKRRTALYVACAAGNTDVADTLLAVGASSEGHGAWQRTPLHIAAYEAHTSAIRSLLGAGADPWAVNGRGQTPSDVSFLYNANGKVLELLEQAINMRRVIFTGTGGLVGATFVHDNGQVGDVTAVTEQWSFTLEVKLDRWKMGNRSGARVYLPV 256
            SL SLH+AAR+GDS SLQRLI+ IDP AA+K+AAVL   D+R     +P + +    K   K      +++  A+ + G  K+   S L RLLQKQD+KRRTALYVACA+GNT++AD LL VGAS +GHGAWQRTP          SA+R LLGAGADPWA+N RGQTPS+VS ++NAN + L LLE+A  MRR + TGT GL+G TFVHD+GQVG V    E+W+FTLEV+LD WKM N SGA++YLPV
Sbjct:   11 SLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGDSRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLKRLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPXXXXXXXXXXSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVNGSGAKLYLPV 260          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5852.14310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L9A3_9PHAE1.990e-10043.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIG7_ECTSI3.550e-7757.60Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 138..167
e-value: 7.5
score: 15.5
coord: 105..134
e-value: 2.8
score: 16.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 138..170
score: 10.125
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 98..166
e-value: 1.2E-8
score: 35.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 105..192
score: 18.669
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 100..194
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 13..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5852contigL-elsbetiae_contig5852:694..4972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5852.14310.1mRNA_L-elsbetiae_contig5852.14310.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5852 694..4972 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5852.14310.1 ID=prot_L-elsbetiae_contig5852.14310.1|Name=mRNA_L-elsbetiae_contig5852.14310.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=539bp
MSRPNSSGSLASLHDAARKGDSRSLQRLISIIDPAAAQKVAAVLLQRDNR
KPAAGAPPSPSKKVVKEPRKATDGPQTRVARARRGPGKQTLASPLARLLQ
KQDTKRRTALYVACAAGNTDVADTLLAVGASSEGHGAWQRTPLHIAAYEA
HTSAIRSLLGAGADPWAVNGRGQTPSDVSFLYNANGKVLELLEQAINMRR
VIFTGTGGLVGATFVHDNGQVGDVTAVTEQWSFTLEVKLDRWKMGNRSGA
RVYLPVRGQQHHTSTRSSSDDLTAPTGHSKADSAHPRPKPCEQSIPWSAK
TVGRMRLESDGLLKVNADSLVGARANTRVGRGAVISVRDVSIRCEVETVR
VNNAETIEGVTTESRKATYDRTGDGANFDAGEGHRTLLAKDARTCQHSRT
PEYDSCAPSVVDGGPTIPESPCVDGSNRRRDGHGGHSEDGAEAPGRVKRQ
EEECCKHEAPSPTVSERCLNERIIHVASREGAPGDCGAYHRVGDCGRRRS
GDDDEDDVKSDAWDGCSVGTERAAEFDEWAATTAMERTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf