prot_L-elsbetiae_contig5828.14268.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5828.14268.1
Unique Nameprot_L-elsbetiae_contig5828.14268.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length229
Homology
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BLAST of mRNA_L-elsbetiae_contig5828.14268.1 vs. uniprot
Match: D7FT97_ECTSI (T5orf172 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT97_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 8.850e-106
Identity = 159/228 (69.74%), Postives = 176/228 (77.19%), Query Frame = 0 
Query:    1 MTGFSHLKKKELVRRMEDYDSLDISKQGTKTTRSPTGRGKIMKTILGGKQKREQHRQRTRKKGPLRSRAQERFDVGPSAQDTPGFLYIYSEPGSESSGDGSSGDRVKEWKIGKTILDPPERRMNQSAQNNRKVYKLHASWYVPWCGYVEKIVHLDLDDFQVVPGKEKKWEGGGREDGGTEWFRTDIDIIEARVKLAIRMVAAREADEADSLGIS-AFCGMFRCGLPKR 227
            MTG+SHLKK+EL+RRM DY S D   +G K + S    GK  +    G+  +E+ +QR R KGPLRSRAQERFD GPS QDTPGFLYIY E G          D+ KEWKIGKT LDPPERRM QSA NNRK Y L ASW+VPWCGYVEKIVHLDLDD +VVPGKEK W+GGGREDGGTEWFR DID++EARVKLAIRMVAAREADEAD LG+  AFCGMFRCGLP R
Sbjct:  135 MTGYSHLKKQELIRRMADYKSSDNGSKGVKASPSVARGGKATRIRFLGRGGKEKQQQRARMKGPLRSRAQERFDAGPSPQDTPGFLYIYCESGXXXX---XXXDKTKEWKIGKTTLDPPERRMKQSAHNNRKAYTLRASWHVPWCGYVEKIVHLDLDDLKVVPGKEKSWDGGGREDGGTEWFRADIDVVEARVKLAIRMVAAREADEADFLGVQPAFCGMFRCGLPVR 359
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BLAST of mRNA_L-elsbetiae_contig5828.14268.1 vs. uniprot
Match: A0A6H5JBR9_9PHAE (T5orf172 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR9_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 5.330e-97
Identity = 144/213 (67.61%), Postives = 162/213 (76.06%), Query Frame = 0 
Query:   16 MEDYDSLDISKQGTKTTRSPTGRGKIMKTILGGKQKREQHRQRTRKKGPLRSRAQERFDVGPSAQDTPGFLYIYSEPGSESSGDGSSGDRVKEWKIGKTILDPPERRMNQSAQNNRKVYKLHASWYVPWCGYVEKIVHLDLDDFQVVPGKEKKWEGGGREDGGTEWFRTDIDIIEARVKLAIRMVAAREADEADSLGIS-AFCGMFRCGLPKR 227
            M DY+S D   +G K + +    GK  +    G+  +E+ +QR R KGPLRSRAQERFD GPS QDTPGFLYIY E G          D+ +EWKIGKT LDPPERRM QSA NNRK Y L ASW+VPWCGYVEKIVHLDLDD +VVPGKEK W+GGGREDGGTEWFR DI+++EARVKLAIRMVAAREADEAD LG+  AFCGMFRCGLP R
Sbjct:    1 MADYESSDNGSKGVKASAAVAQGGKATRIRFLGRGGKEKQQQRVRMKGPLRSRAQERFDAGPSPQDTPGFLYIYCESGXXXX---XXXDKTREWKIGKTTLDPPERRMKQSAHNNRKTYTLRASWHVPWCGYVEKIVHLDLDDLKVVPGKEKSWDGGGREDGGTEWFRADIEVVEARVKLAIRMVAAREADEADLLGVQPAFCGMFRCGLPIR 210
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5828.14268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FT97_ECTSI8.850e-10669.74T5orf172 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBR9_9PHAE5.330e-9767.61T5orf172 domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018306Bacteriophage T5, Orf172 DNA-bindingPFAMPF10544T5orf172coord: 84..194
e-value: 8.4E-9
score: 35.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5828contigL-elsbetiae_contig5828:2651..3493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5828.14268.1mRNA_L-elsbetiae_contig5828.14268.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5828 2318..4237 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5828.14268.1 ID=prot_L-elsbetiae_contig5828.14268.1|Name=mRNA_L-elsbetiae_contig5828.14268.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
MTGFSHLKKKELVRRMEDYDSLDISKQGTKTTRSPTGRGKIMKTILGGKQ
KREQHRQRTRKKGPLRSRAQERFDVGPSAQDTPGFLYIYSEPGSESSGDG
SSGDRVKEWKIGKTILDPPERRMNQSAQNNRKVYKLHASWYVPWCGYVEK
IVHLDLDDFQVVPGKEKKWEGGGREDGGTEWFRTDIDIIEARVKLAIRMV
AAREADEADSLGISAFCGMFRCGLPKRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018306Phage_T5_Orf172_DNA-bd