prot_L-elsbetiae_contig582.14257.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig582.14257.1
Unique Nameprot_L-elsbetiae_contig582.14257.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length887
Homology
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE)

HSP 1 Score: 707 bits (1826), Expect = 5.050e-236
Identity = 479/824 (58.13%), Postives = 558/824 (67.72%), Query Frame = 0
Query:   15 CSSSRRRHTGRNFLPTLAA------------LLLVLSRNAAVSALDDIAMVAAPDAGITAGASHALKWVYSTDNEVSGTTGDLLPFKIELRSCGGDAEQQAACGTGAICGNPYRILCDAETGPSCMDSDGIYDVNIPEDVTAGVYVFTVTYLGAAGWSSGSSAASDSGSVTGCSESFLVEEAPPAAGAALTATAPGSLQPGDPFTAKWAYDNGSGETGGNFEVNLYSCADSACANDSCGKFVSALCGTDGCFDPGTGDYDVRVPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDVTEPENNKNNSKTAQP-----------TPSPVTAEAGAPRAAATPXXXXXXXXXXXXXXXXXXXXXXSAANTAKTPAPVAAGGTTTSSDGSGNTPGTPPTPVPARVTCNPTAAVAFSYDVED--LVPLIKIAHANEDRDGGGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLPDDSGGPATGAWLMRSCVDIENGVLFEVKGTAETGGDANKVLISSGPL-LLRLRGTGGHLYFLNTEVSSWVETLGGPHILPEDSD-GSEPRSYVGCLSEIEEPGQTCDGVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMHNNHIYGFDPHDDSDYLTIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSRTRVSGNVMNFNKYGVRLLVGSNDNLV--TQNEFESSSQNDIYLYIGSDQDKLTVPGNTGVNLRNTF 809
            C SSRRR   R  LP +              LLL+ +    V+AL +I  VAAP + +TAG  H + WVYSTD    GTTGDL PF+IELRSCGGD  QQA CG G +CGN Y  LCD E G +CMDSDG YDV IPEDV AG YVF+VT+LG + W+SG+S+ SD+G VTGCSESF VEEA      A  A A  SLQPGD FTA+W Y+   GE  G FEVNL+SCAD AC  DSCG  V+ LCG  GC+DPG GDYDVR+PA                                     +    +++      + P           TP+PV +  G        XXXXXXXXXXXXXXXXXXXXX + A     P P A    T+S+  SG  PGTPPTPVP RVTC+P A VAFSY +E   L+PLI I+H +EDRD GGCTNFS L+ W++T  A V E LL P DP T   D +GG ATG WL+R+ VD+ NGV+FEV GT   GGD++K+L+SS P    R+RG GGHLYF  TEV+SWVE    PH+LP+D++ G+EPRSY+GCLSEI E GQTCDGVA+K RG CRMD++ S + YLG+  TESYG+SWKVRGLC DLSN+DTLFE+VRVYGDI   DI+ +WYGHYS+GHLGGVWTNN MH+NH+YGFDPHDDSDYLTI       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SLVETS T V+ N +N NKYGVRL+VGSNDN V  T N   S+ Q+D+YLYIGS  D   V   TG+N RN F
Sbjct:   33 CFSSRRRL--RPLLPKVVTTCSPSAALCCGILLLLPTAITRVAALTEITNVAAPRSNLTAGTYHTVGWVYSTDTGAWGTTGDLRPFEIELRSCGGDDAQQAECGLGELCGNEYLALCDLERGAACMDSDGSYDVLIPEDVDAGRYVFSVTHLGLSSWTSGASSTSDAGLVTGCSESFFVEEAAAKDVLATEAPAASSLQPGDAFTAEWEYEGVDGEANGRFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADTTPGTFKLQVKRVSTDEEACSAEYF---------VVEAAASDSSSGTRAVSTPAXXXXXXXXXXTPAPVISSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEA----APVPSA----TSSATESGEIPGTPPTPVPLRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKTQDADVQE-LLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMFEVMGTEAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHMLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLVETSHTLVTENTLNDNKYGVRLVVGSNDNTVRVTTNSVSSNRQHDLYLYIGSSSDVAEVAPYTGINERNFF 836          
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI)

HSP 1 Score: 531 bits (1368), Expect = 1.630e-174
Identity = 355/696 (51.01%), Postives = 418/696 (60.06%), Query Frame = 0
Query:  191 ALTATAPGSLQPGDPFTAKWAYDNGSGETGGNFEVNLYSCADSACANDSCGKFVSALCGTDGCFDPGTGDYDVRVPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDVTEPENNKNNSKTAQPTPSPVTAEAGAPRAAATPXXXXXXXXXXXXXXXXXXXXXXSAANTAKTPAPVAAGGTTTSSDGSGNTPGTPPTPVPARVTCNPTAAVAFSYDVED--LVPLIKIAHANEDRDGGGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLPDDSGGPATGAWLMRSCVDIENGVLFEVKGTAETGGDANKVLISSGPL-LLRLRGTGGHLYFLNTEVSSWVETLGGPHILPEDSD-GSEPRSYVGCLSEIEEPGQTCDGVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMHNNHIYGFDPHDDSDYLTIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSRTRVSGNVMNFNKYGVRLLVGSNDNLVTQNEFESSSQNDIYLYIGSDQDKLTVPGNTGVNLRNTFDDNTVVSTAKFTVSVEDSEETEVLNNSFFGEGSFRFIRAIATRLSGNSGPPATAAPSVEDSCFTANTGLTPEC 882
            A+ A A  SLQPGD FTA+W Y+   GET GNFEVNL+SCAD AC  DSCG  V+ LCG  GC+DPG GDYDVR+PA                                                      TP     +                                                           PGTPPTPVP RVTC+P A VAFSY +E   L+PLI I+H +EDRD GGCTNFS L+ W++   A V E LL P DP T   D +GG ATG WL+R+ VD+ NGV+FEV GT   GGD++K+L+SS P    R+RG GGHLYF  TEV+SWVE    PH LP+D++ G+EPRSY+GCLSEI E GQTCDGVA+K RG CRMD++ S + YLG+  TESYG+SWKVRGLC DLSN+DTLF++VRVYGD+   DI+ +WYGHYS+GHLGG+WTNN MH+NH+YGFDPHDDSDYLTI         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TS T V+ N +N NKYG+RLLV                            D   V   TG+N RN   +N V+ TA F VSV DS ET + +N F G G+F F R+  TRL  N G  A + P VEDSCFTA++G++PEC
Sbjct:  127 AVEAPAASSLQPGDAFTAEWEYEGADGETNGNFEVNLFSCADQACEQDSCGTLVAELCGEAGCYDPGPGDYDVRIPADT----------------------------------------------------TPGTFKLQI----------------------------------------------------------PGTPPTPVPPRVTCDPAAVVAFSYKLETSTLLPLITISHESEDRDEGGCTNFSGLWEWVKAQDADVQE-LLYPADPTTGEADTTGGAATGVWLLRTSVDVTNGVMFEVMGTQAEGGDSDKILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVADVEPYTGINERNFLSENNVMGTANFPVSVADSSETTLSDNFFLGSGAFSFTRSDETRLWNNEGGAADSTPYVEDSCFTADSGVSPEC 711          
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 4.650e-134
Identity = 362/849 (42.64%), Postives = 463/849 (54.53%), Query Frame = 0
Query:   52 MVAAPDAGITAGASHALKWVYSTDNEVSGTTGDLLPFKIELRSCGGDAEQQAACGTGAICGNPYRILCDAETGPSCMDSDGIYDVNIPEDVTAGVYVFTVTYLGAAGWSSGSSAASDSGSVTGCSESFLVEEAPPAAGAALTA------------TAPGSLQPGDPFTAKWAYDNGSGETGGNFEVNLYSCADS-ACANDSCGKFVSALCGTDGCFDPGTGDYDVRVPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDVTEPENNKNNSKTAQPTPSPVTAEAGAPRAAATPXXXXXXXXXXXXXXXXXXXXXXSAANTAKTPAPVAAGGTTTSSDGSGNTPGTPPTPVPARVTCNPTAAVAFSYDVEDLV-PLIKIAHANEDRDGGGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLP-DDSGGPATGAWLMRSCVDIENGVLFEVKGTAETGGDANKVLISSGPLLL-RLRGTGGHLYFLNTEVSSWVETLGGPHILPEDSDGSEPRSYVGCLSEIE-EPGQTCDGVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMHNNHIYGFDPHDDSDYLTIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSRTRVSGNVMNFNKYGVRLLVGSNDNLVTQNEFESSSQNDIYLYIGSDQDKLTVPGNTGVNLRNTFDDNTVVSTAKFTVSVEDSEETEVLNNSFFGEGSFRFIRAIATRLSGNSGPPATAA-PSVEDSCFTANTGLTPEC 882
            +V+ P     AG +  L + Y TD+   GTTGDL  F IELRS    A+    CG  A+       LC  E    C DSDG YDV IPED  AG Y   +                D  SV  C+++F V       G A+ A             +   L+ G  FT++W YD+G G  GG FE+NL +C D  AC N  CG F +A     GC+DPGTGDYDV VPA                                   +F V E       +    PT +PV  E  AP      XXXXXXXXXXXXXXXXXXXXXXS++++                   G+ PG PPTPVP +V C+ +A ++F Y +ED   PL+ +AHA+ DR   GC   ++LY WL T PA VP G+L+ VD  T    + +    TG WL+ + V I NGV FE+KGT+  GGD +++  SS      R+ G GG++   +T V SW  +    HIL +  DG+  RS++ C+SE+  +  +TCDG AQ   G CRMD+V S + Y G+ +TESYGI+WKVRGLC DLSN+DTLF++VRVYGD+   DI+ MWYGHYS+GHLGGVWT+N MH+NH+YGFDPHDDSDYLTI                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETS   VS N    N++G R+++GS  N++  N    ++ +DIY Y G+D++   V   TG+N  NT+                                  RF+ +  T +  N+G  A+     + +SCFTA +  TP C
Sbjct:   10 VVSTPANSKEAGETFGLSFAY-TDS--GGTTGDLTSFDIELRSHD-SADATTGCGDEAL-----ASLCTREAAGVCSDSDGSYDVQIPEDAEAGKYSIKIMLA-------------DDDSVYACTDAFNVTRPTGEDGLAILAGEASVSEVEVEAASSTYLEQGAAFTSRWVYDDGGGAGGGTFEINLNACGDEGACENGGCGTFSTAXXXXXGCYDPGTGDYDVTVPADQAVGEYKLEVVSADDTDVSSCTAS----------SFLVVE----AGGAPAVSPTETPVD-ETPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSSEPVAXXXXXXXXXXXXXXXGS-PGFPPTPVPDKVVCDDSAELSFVYTLEDTKRPLVTVAHASGDRSEAGCLTLTKLYDWLATEPADVPTGMLLTVDSTTETAVNGTTATPTGIWLLDTSVVITNGVTFEIKGTS-IGGDCDELKFSSTKKAWNRIMGHGGNIDIDSTVVRSWDASKTLDHILKDSDDGTTNRSFIACVSEVVVDADETCDGTAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSNCVVSDNEFTDNRWGFRIILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTY----------------------------------RFLNSDNTHVVDNTGDAASGELDDITNSCFTAESNRTPVC 785          
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 4.670e-93
Identity = 154/308 (50.00%), Postives = 204/308 (66.23%), Query Frame = 0
Query:  384 GSGNTPGTPPTPVPARVTCNPTAAVAFSYDVEDLVP----LIKIAHANEDRDGGGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLPDDSGGPA---TGAWLMRSCVDIENGVLFEVKGTAETGGDANKVLISSGPLLLR-LRGTGGHLYFLNTEVSSWVETLGGPHILPEDSDGSEPRSYVGCLSEIEEPGQTCD-GVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMH---NNHIYGFDPHDDSDYLTIRN 679
            G   +PG PP PVPA+  C+P A ++F+YD  +       L+ I HA+ DR   GC   +E++ WLQ+ P GVP  LL PVDP T     +       TG WL+R+ + + NGV   +KGT+  GGD +++ I S P L+  +RG GG+L    T + SW E L   HIL +DS G EPRSY+ C SE+     TCD G A++ +G CRMDMV S +G++G+  +ESYGI+WKVRG C+D+SN + +F+NV VYGDI  CDIHHMWYG YS+GH GGVWT++ MH   +N++YGFDPHDDSDYLTIRN
Sbjct:   92 GEPGSPGVPPIPVPAKTVCDPAAELSFTYDAREDEEIEGSLVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTS-VGGDCDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRN 397          
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 1.100e-84
Identity = 141/281 (50.18%), Postives = 188/281 (66.90%), Query Frame = 0
Query:  408 VAFSYDVEDLVP----LIKIAHANEDRDGGGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLPDDSGGPA---TGAWLMRSCVDIENGVLFEVKGTAETGGDANKVLISSGPLLLR-LRGTGGHLYFLNTEVSSWVETLGGPHILPEDSDGSEPRSYVGCLSEIEEPGQTCD-GVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMHNNHIYGFDPHDDSDYLTIRN 679
            ++F+YD  +       L+ I HA+ DR   GC   +E++ WLQ+ P GVP  LL PVDP T     +       TG WL+R+ + + NGV   +KGT+  GGD +++ I S   L+  +RG GG+L    T + SW E L   HIL +DS G EPRSY+ C SE+     TCD G A++ +G CRMDMV S +G++G+  +ESYGI+WKVRG C+D+SN + +F+NV VYGDI  CDIHHMWYG YS+GH GGVWT++ MH+N++YGFDPHDDSDYLTIRN
Sbjct:   51 LSFTYDAREDEEIEGALVTIEHASGDRTELGCVTLTEMWQWLQSGPEGVPTDLLYPVDPATGAAITTASTVEELTGVWLVRTSLAVSNGVTMNLKGTS-VGGDCDELKIRSSTTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACTSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRN 329          
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 3.110e-68
Identity = 161/463 (34.77%), Postives = 232/463 (50.11%), Query Frame = 0
Query:  431 DGGGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLPDDSGGPATGAWLMRSCVDIENGVLFEVKGTAETGGDAN-KVLISSGPLLLRLRGTGGHLYFLNTEVSSWVETLGGPHILPEDSDGSEP-------RSYVGCLSEIEEPGQTCDGVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMHNNHIYGFDPHDDSDYLTI--RNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSRTRVSGNVMNFNKYGVRLLVGSNDNLVTQNEFESSSQNDIYLYIGSDQDKLTVPGNTGVNLRNTFDDNTVVSTAKFTVSVEDSEETEVLNNSFFGEGSFRFIRAIATRLSGNSGPPATAAPSVED-SCFTANTGLTPEC 882
            DGGGC   S+LYAW      G  +G +  +D +  + D++    TG WL+ + + +  G     +G    G  A  ++  +SG     +RG GG+LYF +T V+SW            D DG +P       RS++ C+SE+     TC   A    G CRMD++ S MGYLG+  +E+YGI+WKVRG C DLSN D +F++V VYGD+   DIHHM+YG YSFGH GGVWTNN MH+NH YGFDPHDDSDYL I                                                               +++ETS   +  N ++  ++G+R+ +GS++N V  N F++     ++ Y+GSD+    V G  G    N F +NT+ +T +  V +++S+   + NN+F G     F  AI    SGNS P  T    +++ S FT ++GL  EC
Sbjct:    7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRV-DETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSW------------DVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPD-VFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEP--WVGG--GRPCDNEFYNNTIQAT-ETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLPLEC 447          
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 6.210e-63
Identity = 157/493 (31.85%), Postives = 238/493 (48.28%), Query Frame = 0
Query:  392 PPTPVPARVTCNPTAAVAFSYDVEDLVPLIKIAHANEDRDGGGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLPDDSGGPATGAWLMRSCVDIENGVLFEVKGTAETGGDANKVLISSGP--------LLLRLRGTGGHLYFLNTEVSSWVETLGGPHILPEDSDGSEPRSYVGCLSEIE-EPGQTCDGVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMHNNHIYGFDPHDDSDYLTIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SLVETSRTRVSGNVMNFNKYGVRLLVGSNDNLVTQNEFESSSQNDIYLYIGSDQDKLTVPGNTGVNLRNTFDDNTVVSTAKFTVSVEDSEETEVLNNSFFGEGSFRFIRAIATRLSGNSG-PPATAAPSVEDSCF 872
            P TP+P +  CN T AV+  Y        ++   A  + + GGC    +++   +    G   G   P+     +  +     TG WL+   + +E+G+  +V G   +GG A+++ + S P          + LR  GG L F +T+V  W  T         D D ++ RSY+  +SEI  +P QTC+G A+ T G  RMD+V S MGY+G+ D+ESYG++WKVRG CKD SN + +F+ V VYG+I   ++HHM +  Y++GH  G W  N +H+N  YG+DPHDDSD+LTI +                                                             +++E+S   +SGN+   NKYG+R+ VG  DN V+ N   ++SQ  IY Y GSD  ++   G +  N+   FD NTVV   +  + +++S+ T + NN F+  G   F       ++GN G   AT    VE +CF
Sbjct:  106 PNTPIP-KPECNSTQAVSIRYSATTGRLYLE---AGVEGERGGCVTVEQIW---EARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNG-SGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNS-----YDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPE-VFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNI---FDSNTVVGGPQ-AIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580          
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 5.630e-62
Identity = 150/430 (34.88%), Postives = 214/430 (49.77%), Query Frame = 0
Query:  431 DGGGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLPDDSGGPATGAWLMRSCVDIENGVLFEVKGTAETGGDANKVLISS--GPLLLRLRGTGGHLYFLNTEVSSWVETLGGPHILPEDSDGSEPRSYVGCLSEIEEPGQTCDGVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMHNNHIYGFDPHDDSDYLTI--RNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSRTRVSGNVMNFNKYGVRLLVGSNDNLVTQNEFESSSQNDIYLYIGSDQDKLTVPGNTGVNLRNTFDDNTVVSTAKFTVSVEDSEETEVLNNSFFGEGSFRFIRAIATRLSGN 856
            +G GC   ++LY +  T   G  +G +  +D D    D   G  T  WL+ + + I  G +F  KGT+  GGD N++ I S        +RG GG LYF +T V+SW      P    E+      RS++ C+SE +  G  C+G A+   G CRMD++ S + YLG+ D+ESYG++WKVRG CKDLSN + +FE   VYGD+   DIHH++YGHYS+GH GGVWTNN+MH+N  YGFDPHDDSDYLTI                                                               +++E+   ++ GN++N  KYG+R+ +GS +N V QN F   SQ  +Y Y GSD+  ++    +G  L         V      V +++ ++ E   N+F    +F F  +  T  SGN
Sbjct:  445 EGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSG-ITNNWLLAAELYITGGGVFYCKGTS-AGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENG-----RSFLNCVSE-KLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPE-VFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSDGRPSGNVLALNL-----VEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860          
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 1.250e-61
Identity = 171/471 (36.31%), Postives = 250/471 (53.08%), Query Frame = 0
Query:  392 PPTPVPARVTCNPTAAVAFSYDVEDLVPLIKIAHANEDRDGGGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLPDDSGGPATGAWLMRSCVDIENGVLFEVKGTAETGGDANKV-LISSGPLLLRLRGTGGHLYFLNTEVSSWVETLGGPHILPEDSDGSEPRSYVGCLSE-IEEPGQTCDGVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMHNNHIYGFDPHDDSDYLTIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL--VETSRTRVSGNVMNFNKYGVRLLVGSNDNLVTQNEFESSSQNDIYLYIGSDQDKLTVPGNTGVNLRNTFDDNTVVSTAKFTVSVEDSEETEVLNNSFFGEGSFRFIRAIATRLSGNSG 858
            P  P+P +  C+ + AV+  Y    +   + +  A + +  GGC    +++   +       E  L  VD  +    DS   ATG WL+   + +E+G+  +V GT+  GGDA+++ L+S+    + LR  GG L FL+T+V +W  ++ GP     D D  + RSYV  +SE I +  QTC+G A+   G  RMD+  S MGYLG+  +ESYG++WKVRG C D SN D LFE+V VYG+I   DIHH  +G Y++GH  G W  N+MH+N  YGFDPHDDSD+LTI +                                         XXXXXXXXXXXXXXXX   L  +E+    VS N+   NKYG+R  VGS  N+   N    S++   Y Y+GSD   +    ++G +  N F +N ++   + ++ + D++ T+ ++N+F    + RF  A  T +SGN G
Sbjct:   27 PNEPIP-KPECDESIAVSIRYS--SVYERLYLESA-DSKTRGGCVTLEQIWEHQRG------EAPLYAVDSKSGDISDS---ATGTWLLTEELFVEDGITLKVHGTS-AGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGP-----DRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHD-LFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVV---DSGRSQDNVFQENNIIGGVE-SIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIG 473          
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 1.710e-61
Identity = 166/509 (32.61%), Postives = 253/509 (49.71%), Query Frame = 0
Query:  394 TPVPARVTCNPTAAVAFSYDVEDLVPLIKIAHAN-----EDRDG---GGCTNFSELYAWLQTSPAGVPEGLLVPVDPDTNLPDDSGGPATGAWLMRSCVDIENGVLFEVKGTAETGGDANKV-LISSGPLLLRLRGTGGHLYFLNTEVSSWVETLGGPHILPEDSDGSEPRSYVGCLSEI-EEPGQTCDGVAQKTRGVCRMDMVGSNMGYLGWADTESYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLGGVWTNNEMHNNHIYGFDPHDDSDYLTIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL--VETSRTRVSGNVMNFNKYGVRLLVGSNDNLVTQNEFESSSQNDIYLYIGSDQDKLTVPGNTGVNLRNTFDDNTVVSTAKFTVSVEDSEETEVLNNSF-FGEGS---FRFIRAIATRLSGNSGPPAT--AAPSVEDSCFT--ANTGLTPEC 882
            TP  A  T +P   ++      D+   I+ A        E  DG   GGC    +++     S AG  +  L  VDPD+    D     TG WL+   + +E+G+  +V GT E GGDA+++ L+S+    + LR  GG L F+ T+V SW  +   P     D D ++ RSY+  +SEI  +  +TC+G A+ T G  RMD+  S +GYLG+ D+ESYG++WKVRG CKD SN + +F++V VYG++   DIHH+ +G Y++GH  G W  N+MH+N  YGFDPHDDSD+LTI +                                                            L  +E+    VS N    NKYGVR+ VG  DN+ ++N   ++S+ + Y Y+GSD+  +    ++G +  N F  N+  S A+ T+ +++++ T+ L+N F  G+      RF  A+ + + GN+G            DSCF   +++G  P C
Sbjct:   24 TPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWE----SRAG--KAPLYAVDPDSG---DVSETETGTWLLTEELYVEDGITLKVYGTDE-GGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSP-----DEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPE-IFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVV---SSGRSQNNVFSQNSF-SGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig582.14257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J745_9PHAE5.050e-23658.13MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
D7G261_ECTSI1.630e-17451.01Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G257_ECTSI4.650e-13442.64Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JNF4_9PHAE4.670e-9350.00MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FWW1_ECTSI1.100e-8450.18Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI3.110e-6834.77Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LD45_ECTSI6.210e-6331.85Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI5.630e-6234.88Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
Q7XAJ7_9PHAE1.250e-6136.31Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7FXE4_ECTSI1.710e-6132.61Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 743..764
e-value: 2400.0
score: 4.5
coord: 720..742
e-value: 12.0
score: 14.8
coord: 696..718
e-value: 12.0
score: 14.9
coord: 672..694
e-value: 12.0
score: 14.9
coord: 648..670
e-value: 7800.0
score: 0.9
coord: 804..826
e-value: 3400.0
score: 3.4
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 737..780
e-value: 3.2E-5
score: 21.5
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 654..782
e-value: 1.5E-14
score: 53.9
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 464..838
e-value: 2.2E-76
score: 259.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..886
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..46
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..46
score: 0.516
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 623..839

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig582contigL-elsbetiae_contig582:16308..28190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig582.14257.1mRNA_L-elsbetiae_contig582.14257.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig582 16308..28495 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig582.14257.1 ID=prot_L-elsbetiae_contig582.14257.1|Name=mRNA_L-elsbetiae_contig582.14257.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=887bp
MVRRRGRATMETDRCSSSRRRHTGRNFLPTLAALLLVLSRNAAVSALDDI
AMVAAPDAGITAGASHALKWVYSTDNEVSGTTGDLLPFKIELRSCGGDAE
QQAACGTGAICGNPYRILCDAETGPSCMDSDGIYDVNIPEDVTAGVYVFT
VTYLGAAGWSSGSSAASDSGSVTGCSESFLVEEAPPAAGAALTATAPGSL
QPGDPFTAKWAYDNGSGETGGNFEVNLYSCADSACANDSCGKFVSALCGT
DGCFDPGTGDYDVRVPATAAAGKFKLQVKSVAAATSSDADADTAAAAETC
TAAFDVTEPENNKNNSKTAQPTPSPVTAEAGAPRAAATPAPAAASPPTAA
PVPAPTGSPIPSAANTAKTPAPVAAGGTTTSSDGSGNTPGTPPTPVPARV
TCNPTAAVAFSYDVEDLVPLIKIAHANEDRDGGGCTNFSELYAWLQTSPA
GVPEGLLVPVDPDTNLPDDSGGPATGAWLMRSCVDIENGVLFEVKGTAET
GGDANKVLISSGPLLLRLRGTGGHLYFLNTEVSSWVETLGGPHILPEDSD
GSEPRSYVGCLSEIEEPGQTCDGVAQKTRGVCRMDMVGSNMGYLGWADTE
SYGISWKVRGLCKDLSNRDTLFENVRVYGDIDRCDIHHMWYGHYSFGHLG
GVWTNNEMHNNHIYGFDPHDDSDYLTIRNNRCYENGNHGIIASKRCDHLL
VEDNLSSDNGGSGIMLHQVCDDSIVRGNLLENNTDAGISLVETSRTRVSG
NVMNFNKYGVRLLVGSNDNLVTQNEFESSSQNDIYLYIGSDQDKLTVPGN
TGVNLRNTFDDNTVVSTAKFTVSVEDSEETEVLNNSFFGEGSFRFIRAIA
TRLSGNSGPPATAAPSVEDSCFTANTGLTPECVARK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR022441Para_beta_helix_rpt-2
IPR007742NosD_dom
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence