prot_L-elsbetiae_contig581.14245.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig581.14245.1
Unique Nameprot_L-elsbetiae_contig581.14245.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1268
Homology
BLAST of mRNA_L-elsbetiae_contig581.14245.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 772 bits (1994), Expect = 2.920e-255
Identity = 625/1383 (45.19%), Postives = 751/1383 (54.30%), Query Frame = 0
Query:    9 AGNGYRHD--GYAYDDQVDLDDDDAAGYQHGYGGGXXXXXXXXXXXXXXXXXXXXXXXXDSGAARRGGAPPEGRAVYAPPVPASINNRGGTGTSQYXXXXXXXXXPARRAGPPGATRFPNPSTAYGTHAYRSPSSPXXXXXXXXXXXXAGGSTRQHQGFGGVAGQLLDAAGHLSPAAKEVSGKGARY---------AASNDRAAARR---------------GLYAPSGGAAGEAPGAASSKGGYGLNLSVDHHSDDGRDDRFRGRGSSGSQGRGGTPEGFSQHXXXXXXXXXXXXXXXXXXXHHSRA-------------------------------------------------------------------GCWGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAP-RPPGKSLPWAVIEEAGQRQLGVPAEERRTRPKEEQERISPFDGCPIEGCPMADSSGIGVGWMARHLEQHTKVAMERPQKELYIRGTVAEILHDLCLDCEAPPSQRKFERKKMSRALFGMPQEGIGHLAGVMETIVTGDNKNPRVRRCALDLAVGGCEGASGEDTIVRCDLCKAWFHVTCGQVAIGDGMSTEDATDETLCRTCARMAIGATQGKDPTAAMQRQLALVREKSKKMLAFLEXXXXXXXXXXGPLEGVIDLNLSIGARGRTLNSRAPSGVDKKDTADAXXXXXXXXXXXXXVDGKTDAGAATGNNIINXXXXXXXXEGHGG---NYSRPASCAAAGCEQQSRTDSKYCCESCGVRTAEAEMSEAVRHSLEMRSGLDRARRVRETREIKARKHKLGIAMRKVEFPQVPAFGIKREAGLQTMTVRRHRLWQRLIEIGAYWEKVS-------SGSKNLSVNGKSAALMRXXXXXXXXXXXXXXXXXXXXXXXPGG--------SSAGARGSQVAGXXXXXXXXXXXXXXXXPAREVGDEATVETLPAKEVAGAAAAAGETTREAXXDTPRQ--ANGATGGDGGSAVASQAASTGAEGAEDGADRRVPSPSAGAT--------GNEKCTS--QATLXXXXXXXXXGQSASEARAADRGPTPMEV---EEESSAERGVEATADPESGSEKVWAYGVFDGLSVVWYRPPGGGEADQLSSKPQLEEYWRKTCAHDEVPGHFTFWAKDARPHWKRVDVDCSGEEVRPAKKPKVTAAXXXXXXXRQTAREGVASFTCAYCAEETGPLVTEHLEQCYRKVIAERNKRLKRATLRPLREGRRVPGGGSRPXXXXSVTGAVVAAPEEAAALNSPAAIGRQLLSRIVPYADFDELPDPTRFQLHQDLKGWKDSPSRLDFLFKELVRQRNAAIYELQALDREEAEVEANARHDWTADSLRCVPR 1264
            AGNGY +D  GY YD+  D DD D +  QHG+G                             ++ RG   P  R VYAPP    INN  G G+SQY         P+RR GPPGATR+PNPSTAY   +Y  P SP               S RQ QGFGGVAGQLL+AAG LSP+ K  SG  A +         AA  +++AAR                GLYAPSGG +GE PGA SS+G  G         D G + RFR RG S        P    ++                   H  RA                                                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AP RPP   L W  IE AG+R+LGVPAEERRT+   E E +SPF GCPI  CPM  S GI V WMARHLE HTKVAME+PQKELYIR +VAEILH++CLD E P +QRKFER+KMSRAL   P+ GIGHLAG++ET+VTGDNK+P VRRCA DLAVGGCEG + E TIVRCD C AW+HV+CGQ+  GDG+S+E+A +ETLCRTCAR+AIGA QGKDPTA +Q+QL+LVREK  KML FLE          G   GV DL L+I    R +++    GV  KD                   G  +   A GN+            G+GG     +RP  CAAA C ++SR DSK+CC++CGV  AEA +++A+RH +E  +G+DR RR+RETRE+K RK ++G+AM+KVEFP+VP F  +RE  L  + VR+ RLWQRLIEIGAYWEKVS       + ++  +      A   XXX                     GG        S++ + G QV     XXXXXXXXXXXXX       EA V     KEV G            XX T  Q  +NG  G +GG A   + A    +G    A + +   S G          G    T    A +         G++A + +AA+     MEV   + E+  + G+E        + + W YG F    V+WY PPGGGEAD+ +S  QL+ Y R+   +  VPG FTF  KDA P W+RVD          AK     A              GV +F C YC EETGP V+EHLE+CYRK  A RN+RLK ATLRPLR+   + GG SR     SVT  V   P   AAL+SPAAIGRQLLSR + YA+FD LPDP+RFQLH DLKGW++SPSRLDFL+KELVRQRNAAIYELQALDREEAE+E + RHDW  D LR +PR
Sbjct:    2 AGNGYGNDRGGYVYDE--DDDDGDYSAQQHGHGSRNFADRGYSSYDGRYDINNAYQTTRYDPSSPRGLGGPHDRGVYAPPTATIINNNRGVGSSQY---------PSRRGGPPGATRYPNPSTAYDNFSY--PPSPRPPP-----------SPRQPQGFGGVAGQLLNAAGQLSPSNKRASGGRAVFDDEVTIGPAAAGGEKSAARLKSTSAXXXXXXASRFGLYAPSGGGSGEIPGAGSSRGDDG---------DGGGNARFRDRGRSQIAKAPTNP----RYQERTRNSFEERDQQMREQKHQQRAPHQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSRPP---LSWITIERAGKRRLGVPAEERRTKLGGENETVSPFQGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEKPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMSRALLDTPRAGIGHLAGMIETVVTGDNKSPHVRRCAHDLAVGGCEGITREGTIVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRTCARIAIGAPQGKDPTATLQKQLSLVREKRTKMLEFLEEDVET-----GAPCGVFDLPLNI----RDVSTAG--GVGPKD-------------------GNANGPDAGGNS----------NGGNGGVDKRDNRPP-CAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHALVVRKCRLWQRLIEIGAYWEKVSGSRVGVLAATRTAAQTSSRKATAXXXXSVTASGAVDPALSRSAPERLAGGRDRGGVIASASSSGGVQVELDVGXXXXXXXXXXXXXXXXXXXXEAEVSGA-GKEVVGXXXXXXXXXXXXXXGTEGQGASNGCVGWEGGGAK--KRAREDGDGPPQQAAKSLKQTSNGEAASGIDVGGGGAAITEPPSAAVAMGAQSKGKGKAALDPQAAESPTAAMEVSSADPEAEIDTGLEVPDTMAEIAGQAWTYGSFGKERVLWYCPPGGGEADRCTSSEQLQAYLRERYGNGRVPGQFTFSGKDAPPQWERVDARRPDNGSLIAKDKDKAAVPPPPSG-------GVQNFMCVYCGEETGPWVSEHLERCYRKTTAMRNERLKHATLRPLRDNHFLQGG-SR-LGAASVTEPVSVPPS--AALDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDLRSIPR 1289          
BLAST of mRNA_L-elsbetiae_contig581.14245.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 716 bits (1849), Expect = 4.730e-234
Identity = 582/1307 (44.53%), Postives = 703/1307 (53.79%), Query Frame = 0
Query:   87 VPASINNRGGTGTSQYXXXXXXXXXPARRAGPPGATRFPNPSTAYGTHAYRSPSSPXXXXXXXXXXXXAGGSTRQHQGFGGVAGQLLDAAGHLSPAAKEVSGKGARY---------AASNDRAAARR---------------GLYAPSGGAAGEAPGAASSKGGYGLNLSVDHHSDDGRDDRFRGRGSS-------GSQGRGGTPEGFSQHXXXXXXXXXXXXXXXXXXXHHSRAGCWGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPRPPGKS---------------------------------------------------------------------LPWAVIEEAGQRQLGVPAEERRTRPKEEQERISPFDGCPIEGCPMADSSGIGVGWMARHLEQHTKVAMERPQKELYIRGTVAEILHDLCLDCEAPPSQRKFERKKMSRALFGMPQEGIGHLAGVMETIVTGDNKNPRVRRCALDLAVGGCEGASGEDTIVRCDLCKAWFHVTCGQVAIGDGMSTEDATDETLCRTCARMAIGATQGKDPTAAMQRQLALVREKSKKMLAFLEXXXXXXXXXXGPLEGVIDLNLSIGARGRTLNSRAPSGVDKKDTADAXXXXXXXXXXXXXVDGKTDAGAATGNNIINXXXXXXXXEGHGG---NYSRPASCAAAGCEQQSRTDSKYCCESCGVRTAEAEMSEAVRHSLEMRSGLDRARRVRETREIKARKHKLGIAMRKVEFPQVPAFGIKREAGLQTMTVRRHRLWQRLIEIGAYWEKVSSGSKNLSVNGKSAALM---RXXXXXXXXXXXXXXXXXXXXXXXP---------GGSSAGARGSQVAGXXXXXXXXXXXXXXXXPAREVGDEATVETLPAKEVAGAAAAAGETTREAXXDTPRQ--ANGATGGDGGSAVASQAASTGAEGAEDGADRRVPSPSAG--ATGNEKCTSQATLXXXXXXXXXG-------QSASEARAADRGPTPMEV---EEESSAERGVEATADPESGSEKVWAYGVFDGLSVVWYRPPGGGEADQLSSKPQLEEYWRKTCAHDEVPGHFTFWAKDARPHWKRVDVDCSGEEVRPAKKPKVTAAXXXXXXXRQTAREGVASFTCAYCAEETGPLVTEHLEQCYRKVIAERNKRLKRATLRPLREGRRVPGGGSRPXXXXSVTGAVVAAPEEAAALNSPAAIGRQLLSRIVPYADFDELPDPTRFQLHQDLKGWKDSPSRLDFLFKELVRQRNAAIYELQALDREEAEVEANARHDWTADSLRCVPR 1264
            V   INN  G G+SQ+         P+RR GPPGATR+PNPSTAY   +Y  P SP  XXXX           RQ QGFGGVAGQLL+AAG LSP+ K  SG  A +         AA  +++AAR                GLYAPSGG +GE PGA SS+G  G         D G  DRFR RG S         + + GT + F +                    H  +A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +PRPP                                                                        L W  IE AG+R+LGVPAEERR     E E +SPF GCPI  CPM  S GI V WMARHLE HTKVAME+PQKELYIR +VAEILH++CLD E P +QRKFER+KM+RAL   P+ GIGHLAGVMET+VTGDNK+P VR    +   G CEG + E TIVRCD C AW+HV+CGQ+  GDG+S+E+A +ETLCR CAR+ IGA QGKDPTA +Q+QL+LVREK  KML FLE          G   GV DL L+I    R +N+    GV+ KD                   G     AA GN+            G+GG     +RP  CAAA C ++SR DSK+CC++CGV  AEA +++A+RH +E  +G+DR RR+RETRE+K RK ++G+AM+KVEFP+VP F  +RE  L  +  RR RLWQRLIEIGAYWEKVS     +    K+AA     + XXXXXXXXXX            P         GGS A   GS                       E                             XX    Q  +N   G +GG A   + A  G +G    A   +   S G  A+G +     A +         G       ++A + +AA+      +V   + E+  ++G+E        + K W YG FD   V+WY PPGG EAD+ +++ QL+ Y R+   +  VPG FTF  KDA PHW+RVD  C       AK     A              GV +FTC YC EETGP V+EHLE+CYRK  A RN+RLK ATLRPL +   + GG SR     SVT  V   P   A L+SPAAIGRQLLSR + YA+FD LPDP+RFQLH DLKGW++SPSRLDFL+KELVRQRNAAIYELQALDREEAE+E + RHDW  D LR +PR
Sbjct:   53 VATIINNNRGVGSSQH---------PSRRGGPPGATRYPNPSTAYDNFSY--PPSPRPXXXX-----------RQPQGFGGVAGQLLNAAGQLSPSNKRASGGRAVFDDEVTIGPAAAGGEKSAARLKSTSAXXXXXXXSRFGLYAPSGGGSGEIPGAGSSRGDLG---------DGGGSDRFRDRGRSQIARAPTNPRYQDGTRKSFEERDEQVREQKHQQRAP-----HQRKASA---PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRPPAAPADPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPSRPPLSWITIERAGKRRLGVPAEERRMMLGGENETVSPFRGCPIHDCPMGSSDGISVSWMARHLESHTKVAMEQPQKELYIRSSVAEILHEMCLDSEVPRAQRKFERRKMARALLDTPRAGIGHLAGVMETMVTGDNKDPHVRHEPQE---GXCEGITREGTIVRCDKCMAWYHVSCGQMVRGDGISSEEAREETLCRACARITIGAPQGKDPTATLQKQLSLVREKRTKMLEFLERDVET-----GTPCGVFDLPLNI----RDVNTAG--GVELKD-------------------GNAKGPAAGGNS----------NGGNGGVDMRDNRPP-CAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVEESAGIDRGRRLRETRELKTRKQQVGLAMKKVEFPRVPGFKTERETALHGLVARRCRLWQRLIEIGAYWEKVSGSRVGVLAATKTAAQTSSRKAXXXXXXXXXXSGAFDPALSRSAPQRQTGVRDRGGSIASVSGSGGIQVELDVGGCSIAAAAKNDTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGASNICVGWEGGGAK--KRAREGGDGPSQQAANSLKQTSNGEAASGIDVGGGSAAIPETPSAAAMGAHSKGKGKAALDPQAAESTTAATDVSSADPEAEIDKGLEGPDTTAEIAGKAWTYGSFDKERVLWYCPPGGREADRCTNREQLQAYLRERYGNGRVPGQFTFSGKDAPPHWERVDAHCPDNGSLIAKHKDKAAVPPSPSG-------GVQNFTCVYCGEETGPRVSEHLERCYRKTTAMRNERLKHATLRPLPDNHFLQGG-SR-LGAASVTEPVSLPPS--ACLDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDWMKDDLRSIPR 1263          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig581.14245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQA3_ECTSI2.920e-25545.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L313_9PHAE4.730e-23444.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 479..548
e-value: 3.5E-6
score: 28.4
NoneNo IPR availablePANTHERPTHR45691FAMILY NOT NAMEDcoord: 119..345
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 496..544

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig581contigL-elsbetiae_contig581:5702..15221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig581.14245.1mRNA_L-elsbetiae_contig581.14245.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig581 4490..17186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig581.14245.1 ID=prot_L-elsbetiae_contig581.14245.1|Name=mRNA_L-elsbetiae_contig581.14245.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1268bp
MAGRNSPRAGNGYRHDGYAYDDQVDLDDDDAAGYQHGYGGGGFGSRGYSS
RNSSYDSHRYQNTRYDSGAARRGGAPPEGRAVYAPPVPASINNRGGTGTS
QYRGGAGTSQYPARRAGPPGATRFPNPSTAYGTHAYRSPSSPPPSPSRSP
SDSSAGGSTRQHQGFGGVAGQLLDAAGHLSPAAKEVSGKGARYAASNDRA
AARRGLYAPSGGAAGEAPGAASSKGGYGLNLSVDHHSDDGRDDRFRGRGS
SGSQGRGGTPEGFSQHQHQHLLPPPPAREAVGAGAHHSRAGCWGDAGGGG
GRGARSKSRSRSRSSSRSVSPRPAPAASPPPPPPPPPPTAPRPPGKSLPW
AVIEEAGQRQLGVPAEERRTRPKEEQERISPFDGCPIEGCPMADSSGIGV
GWMARHLEQHTKVAMERPQKELYIRGTVAEILHDLCLDCEAPPSQRKFER
KKMSRALFGMPQEGIGHLAGVMETIVTGDNKNPRVRRCALDLAVGGCEGA
SGEDTIVRCDLCKAWFHVTCGQVAIGDGMSTEDATDETLCRTCARMAIGA
TQGKDPTAAMQRQLALVREKSKKMLAFLEEESGGAAAGGGPLEGVIDLNL
SIGARGRTLNSRAPSGVDKKDTADADGAAAAAPAPAPAVDGKTDAGAATG
NNIINNSNGGGGGEGHGGNYSRPASCAAAGCEQQSRTDSKYCCESCGVRT
AEAEMSEAVRHSLEMRSGLDRARRVRETREIKARKHKLGIAMRKVEFPQV
PAFGIKREAGLQTMTVRRHRLWQRLIEIGAYWEKVSSGSKNLSVNGKSAA
LMRRQIVAATAAAAAAAAAAAATAAAPGGSSAGARGSQVAGGSGPAAAAN
GTVAGSTPAREVGDEATVETLPAKEVAGAAAAAGETTREAAGDTPRQANG
ATGGDGGSAVASQAASTGAEGAEDGADRRVPSPSAGATGNEKCTSQATLA
AAAGTGGAGQSASEARAADRGPTPMEVEEESSAERGVEATADPESGSEKV
WAYGVFDGLSVVWYRPPGGGEADQLSSKPQLEEYWRKTCAHDEVPGHFTF
WAKDARPHWKRVDVDCSGEEVRPAKKPKVTAAAAAAAAARQTAREGVASF
TCAYCAEETGPLVTEHLEQCYRKVIAERNKRLKRATLRPLREGRRVPGGG
SRPGGGASVTGAVVAAPEEAAALNSPAAIGRQLLSRIVPYADFDELPDPT
RFQLHQDLKGWKDSPSRLDFLFKELVRQRNAAIYELQALDREEAEVEANA
RHDWTADSLRCVPRTYS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD