prot_L-elsbetiae_contig5806.14242.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5806.14242.1
Unique Nameprot_L-elsbetiae_contig5806.14242.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length236
Homology
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BLAST of mRNA_L-elsbetiae_contig5806.14242.1 vs. uniprot
Match: D7FYQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ2_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 9.720e-22
Identity = 60/97 (61.86%), Postives = 64/97 (65.98%), Query Frame = 0 
Query:  135 QIDASMARRVEIDAQNAELQLVVXXXXXXXXXXXXXXXXXXX-----EVEDLSTRLGARDKERKEQEVLREMLDSAHMVFRRESPEEAASEEVRSVR 226
            QID SMARRVEIDAQNAELQLVV                        EVEDLSTRL  RDKERKEQE+LREMLDSAHMVFRRESPEE  +  ++  R
Sbjct:    7 QIDVSMARRVEIDAQNAELQLVVDEADSRKRQLQEQVGRLQVDEVKTEVEDLSTRLETRDKERKEQELLREMLDSAHMVFRRESPEEVGATSLQRSR 103
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5806.14242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYQ2_ECTSI9.720e-2261.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..184
NoneNo IPR availableCOILSCoilCoilcoord: 94..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5806contigL-elsbetiae_contig5806:7073..11017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5806.14242.1mRNA_L-elsbetiae_contig5806.14242.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5806 5831..11273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5806.14242.1 ID=prot_L-elsbetiae_contig5806.14242.1|Name=mRNA_L-elsbetiae_contig5806.14242.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
MNTAESRKHEAFESGNPRDAYSSVSHLKGNLDSLSFAIGLREEGGQEGAL
ERLLPMLKIQPRPAGDVNRRGDKTREKGFLECDHPDCIVREEKIKKLQEM
IDEEQEGLERLTFEIDSLNERHARAATELETLDDQIDASMARRVEIDAQN
AELQLVVDEAESRKRQLQAQADEVKSEVEDLSTRLGARDKERKEQEVLRE
MLDSAHMVFRRESPEEAASEEVRSVRALPTFLASS*
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