mRNA_L-elsbetiae_contig5806.14242.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5806.14242.1 vs. uniprot
Match: D7FYQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ2_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 1.090e-20 Identity = 60/97 (61.86%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 529 QIDASMARRVEIDAQNAELQLVVXXXXXXXXXXXXXXXXXXX-----EVEDLSTRLGARDKERKEQEVLREMLDSAHMVFRRESPEEAASEEVRSVR 804 QID SMARRVEIDAQNAELQLVV EVEDLSTRL RDKERKEQE+LREMLDSAHMVFRRESPEE + ++ R Sbjct: 7 QIDVSMARRVEIDAQNAELQLVVDEADSRKRQLQEQVGRLQVDEVKTEVEDLSTRLETRDKERKEQELLREMLDSAHMVFRRESPEEVGATSLQRSR 103 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5806.14242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5806.14242.1 >prot_L-elsbetiae_contig5806.14242.1 ID=prot_L-elsbetiae_contig5806.14242.1|Name=mRNA_L-elsbetiae_contig5806.14242.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp MNTAESRKHEAFESGNPRDAYSSVSHLKGNLDSLSFAIGLREEGGQEGALback to top mRNA from alignment at L-elsbetiae_contig5806:5831..11273+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5806.14242.1 ID=mRNA_L-elsbetiae_contig5806.14242.1|Name=mRNA_L-elsbetiae_contig5806.14242.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5443bp|location=Sequence derived from alignment at L-elsbetiae_contig5806:5831..11273+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5806:5831..11273+ >mRNA_L-elsbetiae_contig5806.14242.1 ID=mRNA_L-elsbetiae_contig5806.14242.1|Name=mRNA_L-elsbetiae_contig5806.14242.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1416bp|location=Sequence derived from alignment at L-elsbetiae_contig5806:5831..11273+ (Laminarionema elsbetiae ELsaHSoW15)back to top |