prot_L-elsbetiae_contig5806.14241.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5806.14241.1
Unique Nameprot_L-elsbetiae_contig5806.14241.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length424
Homology
BLAST of mRNA_L-elsbetiae_contig5806.14241.1 vs. uniprot
Match: D7FYQ1_ECTSI (CID domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ1_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 3.460e-69
Identity = 268/422 (63.51%), Postives = 293/422 (69.43%), Query Frame = 0
Query:    4 QLASIPDGPEFEPGLSEQVEAVLQEINVKDKPSSAGRLYEWITQHPGPVPAATAAFAVKVATKIPMTTPERRLSLLYATHELFRQASKDLDLDFDYAVWEDAIRALVPWTIRRQ-SDADKMKINKSVLKAWIASGWFKRGFVEGLSTGKTTAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVAGPWVEQDRRVSAFHPVD-FAGAGYSPIXXXXXXXXXXXXXXXXXPSHPGAQELAVPSATELAAAVADMSALAKAVQAVASGGSXXXXXXXXXXXAGGINTVTPSPEGNNAGAGASPDGGAAAATPGDTTLDLQRKALSLTLDGCGLIRRIGKAMR 423
            QLA+IPDGPEFEP LSEQVE VLQEINVK++PSS G+LY+WI ++PGP  AATAAFAVKVAT     + ERRLSLLYATHELFRQ SK+LD+DFDY  W +A+RALVPWT+R+Q S+ DK KI KSVLK W+ SGWFK+ FVEGL  G+   K+            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXX          XXXXXXXXXXXXXXXXXXX   AGPWVEQDR  SAFHPVD  A AGYSPI   XXXXXXXXX        PG  ELA P+  EL AAVA+MSAL KAVQA A+   XXXXXXXXXXX                               G++  +LQRKALSLTLDGCGLIRRIGKAMR
Sbjct:    3 QLAAIPDGPEFEPTLSEQVENVLQEINVKERPSSVGKLYQWILKNPGPEAAATAAFAVKVATTA-KESAERRLSLLYATHELFRQTSKNLDMDFDYEAWTEAVRALVPWTVRKQKSEVDKAKIIKSVLKTWVTSGWFKKDFVEGLLPGRNIVKRVSPPALSPAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXGNAIKRGRVDXXXXXXXXXXXXXXXXXXXXXXAGPWVEQDRESSAFHPVDDTARAGYSPIPSGXXXXXXXXXTP-----QPGDVELAPPTVGELEAAVAEMSALTKAVQADAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXAAGESPQELQRKALSLTLDGCGLIRRIGKAMR 395          
BLAST of mRNA_L-elsbetiae_contig5806.14241.1 vs. uniprot
Match: A0A6H5JRI0_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRI0_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 5.900e-69
Identity = 263/422 (62.32%), Postives = 290/422 (68.72%), Query Frame = 0
Query:    4 QLASIPDGPEFEPGLSEQVEAVLQEINVKDKPSSAGRLYEWITQHPGPVPAATAAFAVKVATKIPMTTPERRLSLLYATHELFRQASKDLDLDFDYAVWEDAIRALVPWTIRRQ-SDADKMKINKSVLKAWIASGWFKRGFVEGLSTGKTTAKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVAGPWVEQDRRVSAFHPVD-FAGAGYSPIXXXXXXXXXXXXXXXXXPSHPGAQELAVPSATELAAAVADMSALAKAVQAVASGGSXXXXXXXXXXXAGGINTVTPSPEGNNAGAGASPDGGAAAATPGDTTLDLQRKALSLTLDGCGLIRRIGKAMR 423
            QLA+IPDGPEFEP LSEQVE +LQEINVK++PSS G+LY+WI ++PGP  AATAAFAVK+AT     + ERRLSLLYATHELFRQ SK+LD+DFDY  W +A+RALVPWT+R+Q S+ DK KI+KSVLK W+ SGWFK+ F+EGL  GK+  K+               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AGPWVEQDR  SAFHPVD  A AGYSPI                    PG  ELA PS  EL AAVA+MSAL KAVQA      XXXXXXXXXXX                          AA   G++  +LQRKALSLTLDGCGLIRRIGKAMR
Sbjct:    3 QLAAIPDGPEFEPTLSEQVENILQEINVKERPSSVGKLYQWILKNPGPEAAATAAFAVKLATTA-KESAERRLSLLYATHELFRQTSKNLDMDFDYEAWTEAVRALVPWTVRKQKSEVDKAKIHKSVLKTWVTSGWFKKDFLEGLLPGKSVIKRASPPALSPAAAPATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPWVEQDRESSAFHPVDDIARAGYSPIPSGAGGVAGGGGGAP----QPGDVELAPPSTGELEAAVAEMSALTKAVQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA---GESPQELQRKALSLTLDGCGLIRRIGKAMR 399          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5806.14241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYQ1_ECTSI3.460e-6963.51CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JRI0_9PHAE5.900e-6962.32CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5806contigL-elsbetiae_contig5806:561..4980 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5806.14241.1mRNA_L-elsbetiae_contig5806.14241.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5806 561..5165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5806.14241.1 ID=prot_L-elsbetiae_contig5806.14241.1|Name=mRNA_L-elsbetiae_contig5806.14241.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=424bp
MAQQLASIPDGPEFEPGLSEQVEAVLQEINVKDKPSSAGRLYEWITQHPG
PVPAATAAFAVKVATKIPMTTPERRLSLLYATHELFRQASKDLDLDFDYA
VWEDAIRALVPWTIRRQSDADKMKINKSVLKAWIASGWFKRGFVEGLSTG
KTTAKKTPPTSSLASSAAPPASAPGPGSGRRRRAGQSSGGGGSVGTSSSG
GGGGGGGGGARGAGGAGRGSKRQRASPSSLPSIPAAPAAVGNGGKNSRAD
GGGGGGGGGSGGGSGGVVAGPWVEQDRRVSAFHPVDFAGAGYSPIGGGGD
GSSAAGSGTGGAPSHPGAQELAVPSATELAAAVADMSALAKAVQAVASGG
SSGGAAGGTGEGAGGINTVTPSPEGNNAGAGASPDGGAAAATPGDTTLDL
QRKALSLTLDGCGLIRRIGKAMR*
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