prot_L-elsbetiae_contig5778.14189.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5778.14189.1
Unique Nameprot_L-elsbetiae_contig5778.14189.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length379
Homology
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BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: A0A6H5JGF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF5_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 4.930e-40
Identity = 98/158 (62.03%), Postives = 116/158 (73.42%), Query Frame = 0 
Query:  143 GLLCGGLLAAGYLVLRVISELVPGTLAGRVLAALLGLPAAAAP-EGSGGAGDSLVAAQKAGTLVVTYLVFLSTAVNFALHGFLTKLMNFIIVASQDFLRLWQASV-AASGDQGGAG----RAGCAPSGPAAMLLDSLSIGHESVLRPAEEDSLLARVL 294
            GLLCG ++ AGYLV+R +SEL+ G++ GR L+ LLGL AAA+  EG+ G G      +  G L+V YL+ +STA NFALHGFLTKLMNFIIVASQDFLRLWQA+V AAS +Q  AG     A   P+ PAAMLLDSLSIGHE+VLR AE D L AR L
Sbjct:  290 GLLCGAVIGAGYLVVRTVSELLTGSMVGRALSVLLGLSAAASTSEGADGGGGQPTVGEGVGRLLVAYLIVVSTAANFALHGFLTKLMNFIIVASQDFLRLWQATVDAASDEQDRAGGRPAAAANVPASPAAMLLDSLSIGHETVLRTAERDFLQARGL 447
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BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: D7G288_ECTSI (D-lactate dehydrogenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G288_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.250e-36
Identity = 78/84 (92.86%), Postives = 80/84 (95.24%), Query Frame = 0 
Query:    1 MKDNVLSMTVVLPDGQVVKTSSRAKKSSAGYDLTRLFVGSEGALGIITEVTLKAHKIPAHSSSVRVSFDSIDAAAKTVQDTLAA 84
            MKDNVLSMTVVL DGQ VKTSSRAKKSSAGYDLTRLFVGSEG LGIITEVTLK HKIPA+S+SVRVSFDSIDAAAKTVQDTLAA
Sbjct:  119 MKDNVLSMTVVLADGQEVKTSSRAKKSSAGYDLTRLFVGSEGTLGIITEVTLKIHKIPAYSNSVRVSFDSIDAAAKTVQDTLAA 202
[Close]
BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: D8LU93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU93_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 5.950e-33
Identity = 92/162 (56.79%), Postives = 109/162 (67.28%), Query Frame = 0 
Query:  143 GLLCGGLLAAGYLVLRVISELVPGTLAGRVLAALLGLPAAAAP-EGSGGAGDSLVAAQKAGTLVVTYLVFLSTAVNFALHGFLTKLMNFIIVASQDFLRLWQASV-AASGDQGGAG----RAGCAPSGPAAMLLDSLSIGHESVLRPAEEDSLLARVLPPSS 298
            GLLCG ++ AGYLVLR +SEL+PG++ GR L+ LLGLP+AA+  EG+ G G   V  +  G L+V YL+  STA NFALHGFLTK+MNFIIVA         A+V AAS +Q  AG     A   P  PAAMLLDSLSIGHE+VLR AE D L AR L   S
Sbjct:  201 GLLCGAVIGAGYLVLRTVSELLPGSMVGRALSVLLGLPSAASTSEGTDGGGGQPVVGEGVGRLLVAYLIVASTAANFALHGFLTKVMNFIIVA---------ATVDAASDEQDRAGGRPAAAASVPVSPAAMLLDSLSIGHETVLRTAERDFLQARGLDGGS 353
[Close]
BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: A0A835YUA6_9STRA (Putative d-lactate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA6_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.670e-24
Identity = 56/84 (66.67%), Postives = 67/84 (79.76%), Query Frame = 0 
Query:    1 MKDNVLSMTVVLPDGQVVKTSSRAKKSSAGYDLTRLFVGSEGALGIITEVTLKAHKIPAHSSSVRVSFDSIDAAAKTVQDTLAA 84
            M++NV+SMT VLP+G ++KT  RAKKS+AGYDLTRL VGSEG L +ITEVTLK HKIP +S  +RV F SI  A+  VQDTLAA
Sbjct:  193 MRENVVSMTAVLPNGDIIKTGGRAKKSAAGYDLTRLLVGSEGTLAVITEVTLKVHKIPTYSEGMRVVFRSIAEASAVVQDTLAA 276
[Close]
BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: A0A1H8MU42_9RHOB (D-lactate dehydrogenase (Cytochrome) n=1 Tax=Salinihabitans flavidus TaxID=569882 RepID=A0A1H8MU42_9RHOB)

HSP 1 Score: 111 bits (278), Expect = 1.760e-23
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 0 
Query:    1 MKDNVLSMTVVLPDGQVVKTSSRAKKSSAGYDLTRLFVGSEGALGIITEVTLKAHKIPAHSSSVRVSFDSIDAAAKTVQDTL 82
            MKDNVLS+ VV+PDG+V++T+SRAKKSSAGYDLTRL +GSEG LGI+TE+TLK   IP   SS R SFDS+ AA + V  T+
Sbjct:  168 MKDNVLSLEVVMPDGEVIRTASRAKKSSAGYDLTRLMIGSEGTLGIVTEITLKLQGIPEAMSSARCSFDSVQAACEAVMTTI 249
[Close]
BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: A0A151ZSE6_9MYCE (Glycolate oxidase subunit D-like protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZSE6_9MYCE)

HSP 1 Score: 109 bits (272), Expect = 1.930e-22
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:    1 MKDNVLSMTVVLPDGQVVKTSSRAKKSSAGYDLTRLFVGSEGALGIITEVTLKAHKIPAHSSSVRVSFDSIDAAAKTVQDTL 82
            MKDNV+S+  +LP+G V+KT S+AKKSSAGYDLT LF+GSEG LGI TEVTLK   +P HSS   V+FDSID A+KTV  T+
Sbjct:  253 MKDNVISLRAILPNGDVIKTRSKAKKSSAGYDLTHLFIGSEGTLGITTEVTLKIQPLPEHSSVSLVTFDSIDDASKTVIQTM 334
[Close]
BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: A0A7D7VKU0_9RHOB (FAD-binding protein n=1 Tax=Boseongicola sp. TaxID=1886600 RepID=A0A7D7VKU0_9RHOB)

HSP 1 Score: 108 bits (270), Expect = 2.050e-22
Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:    1 MKDNVLSMTVVLPDGQVVKTSSRAKKSSAGYDLTRLFVGSEGALGIITEVTLKAHKIPAHSSSVRVSFDSIDAAAKTVQDTL 82
            MK+NVLS+ VVLPDG+V++T  RAKKSSAGYDLTRLF+GSEG LGIITE+TLK H IP   SS   SF SI++A + V  T+
Sbjct:  168 MKNNVLSLKVVLPDGRVIRTGQRAKKSSAGYDLTRLFIGSEGTLGIITEITLKLHGIPEAMSSATCSFPSIESACRAVISTI 249
[Close]
BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: A0A0P1I1V5_9RHOB (Putative FAD-linked oxidoreductase n=4 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0P1I1V5_9RHOB)

HSP 1 Score: 107 bits (268), Expect = 3.860e-22
Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:    1 MKDNVLSMTVVLPDGQVVKTSSRAKKSSAGYDLTRLFVGSEGALGIITEVTLKAHKIPAHSSSVRVSFDSIDAAAKTVQDTL 82
            MKDNVL++ VV P G V++T+SRAKKSSAGYDLTRL VGSEG LG+ITE+TLK   +P   SS RVSFD++DAA + V  T+
Sbjct:  168 MKDNVLALEVVTPKGDVIRTASRAKKSSAGYDLTRLMVGSEGTLGLITEITLKLQGVPEAMSSARVSFDTVDAACQAVMMTI 249
[Close]
BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: A0A0P1FEH6_9RHOB (Putative FAD-linked oxidoreductase n=7 Tax=Shimia TaxID=573139 RepID=A0A0P1FEH6_9RHOB)

HSP 1 Score: 107 bits (266), Expect = 7.310e-22
Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:    1 MKDNVLSMTVVLPDGQVVKTSSRAKKSSAGYDLTRLFVGSEGALGIITEVTLKAHKIPAHSSSVRVSFDSIDAAAKTVQDTL 82
            MKDNVL++ VVLP G+V++T+SRAKKSSAGYDLTRL +G+EG LGIITE+TLK   IP   SS R SF S+DAA + V  T+
Sbjct:  173 MKDNVLALEVVLPSGEVIRTASRAKKSSAGYDLTRLMIGAEGTLGIITEITLKLQGIPEAMSSARCSFASVDAACQAVMATI 254
[Close]
BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Match: A0A366X758_9RHOB (FAD-binding oxidoreductase n=1 Tax=Phaeobacter gallaeciensis TaxID=60890 RepID=A0A366X758_9RHOB)

HSP 1 Score: 106 bits (265), Expect = 9.570e-22
Identity = 52/82 (63.41%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:    1 MKDNVLSMTVVLPDGQVVKTSSRAKKSSAGYDLTRLFVGSEGALGIITEVTLKAHKIPAHSSSVRVSFDSIDAAAKTVQDTL 82
            MKDNVL++ VV+PDG+V++T+ RAKKSSAGYDLTRL +GSEG LG+ITEVTLK   IP   SS R SF ++DAA + V  T+
Sbjct:  168 MKDNVLALEVVMPDGEVIRTAQRAKKSSAGYDLTRLMIGSEGTLGLITEVTLKLQGIPEAISSARCSFPTVDAACRAVMMTI 249
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5778.14189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGF5_9PHAE4.930e-4062.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G288_ECTSI1.250e-3692.86D-lactate dehydrogenase, putative n=1 Tax=Ectocarp... [more]
D8LU93_ECTSI5.950e-3356.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YUA6_9STRA4.670e-2466.67Putative d-lactate dehydrogenase n=1 Tax=Tribonema... [more]
A0A1H8MU42_9RHOB1.760e-2365.85D-lactate dehydrogenase (Cytochrome) n=1 Tax=Salin... [more]
A0A151ZSE6_9MYCE1.930e-2265.85Glycolate oxidase subunit D-like protein n=1 Tax=T... [more]
A0A7D7VKU0_9RHOB2.050e-2265.85FAD-binding protein n=1 Tax=Boseongicola sp. TaxID... [more]
A0A0P1I1V5_9RHOB3.860e-2264.63Putative FAD-linked oxidoreductase n=4 Tax=Roseoba... [more]
A0A0P1FEH6_9RHOB7.310e-2264.63Putative FAD-linked oxidoreductase n=7 Tax=Shimia ... [more]
A0A366X758_9RHOB9.570e-2263.41FAD-binding oxidoreductase n=1 Tax=Phaeobacter gal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.465.40coord: 1..79
e-value: 3.2E-21
score: 77.2
NoneNo IPR availablePANTHERPTHR11748D-LACTATE DEHYDROGENASEcoord: 1..83
NoneNo IPR availablePANTHERPTHR11748:SF111D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATEDcoord: 1..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 348..378
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 331..347
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..324
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..303
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 325..330
IPR016166FAD-binding domain, PCMH-typePROSITEPS51387FAD_PCMHcoord: 1..57
score: 11.345
IPR036318FAD-binding, type PCMH-like superfamilySUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5778contigL-elsbetiae_contig5778:3673..7656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5778.14189.1mRNA_L-elsbetiae_contig5778.14189.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5778 3478..8027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5778.14189.1 ID=prot_L-elsbetiae_contig5778.14189.1|Name=mRNA_L-elsbetiae_contig5778.14189.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=379bp
MKDNVLSMTVVLPDGQVVKTSSRAKKSSAGYDLTRLFVGSEGALGIITEV
TLKAHKIPAHSSSVRVSFDSIDAAAKTVQDTLAATWRRVWSAGRPRRRGH
RVQHVVGRVLPQAEEAPPPLRPAQRVCAAAVPLAGGLRQREGGLLCGGLL
AAGYLVLRVISELVPGTLAGRVLAALLGLPAAAAPEGSGGAGDSLVAAQK
AGTLVVTYLVFLSTAVNFALHGFLTKLMNFIIVASQDFLRLWQASVAASG
DQGGAGRAGCAPSGPAAMLLDSLSIGHESVLRPAEEDSLLARVLPPSSSC
TRSLSFVCSLTCIDVCMYVCICMHVRRARRLVAAFLFWFAVVFRRAHDFG
MTGRNLDDTIFNKFFVPAGCLPVPRGVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016166FAD-bd_PCMH
IPR036318FAD-bd_PCMH-like_sf