prot_L-elsbetiae_contig577.14182.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig577.14182.1
Unique Nameprot_L-elsbetiae_contig577.14182.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length350
Homology
BLAST of mRNA_L-elsbetiae_contig577.14182.1 vs. uniprot
Match: D7G864_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G864_ECTSI)

HSP 1 Score: 407 bits (1045), Expect = 1.430e-137
Identity = 249/365 (68.22%), Postives = 273/365 (74.79%), Query Frame = 0
Query:   16 RKAVRFSSVLISDIWQADSADVYSRRSIVVDLSKTPFALFRRDAVMMKQAR-SLSGSVPLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS------------------GG----RLWELESSESSEGHTTDLETDDTETDWHSD--DADSVCSSSAESSGCLVTEQ-LRRGSNSEG--PAFYGVWKRTSSEGYEELLLKSGVPKRAVAVAMRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFWIGEEPKQQDTIGKKSYEVSMNWAHLSGHGSEDELALSSVCHQLGEEVIAIRSLHDGGSRMVLTQIVRRPAENYEVRAKHFFKLVTSKAELRDTGREQKQQ---LSSTVVTVRRQK 349
            R+ VRF    IS IW ADS   Y+RRSIVVDLSKTPFALFRRDAVMMKQAR S+  S PLPP                  XXXXXXXXX        +                  GG    +LWE ESSESSEGHT DLETDDTETDWHSD  D  SV S + E+  C+V +Q LRRGSNSE   PAFYGVWKRTSSEGYEELLL SGVPKRAVA+AM+KHPVHIIDHDGSYFRLIVKNGLSKVDNTF+IG+EPKQ D IGK+SYEVSMNWAHLSGHG EDELAL+S+CHQ GEEVIAIRSLH+GG +MVLTQIVRRPAE YEVRAKHFFK VTSK+ELR  G++Q +Q   LSST+VTVRR+K
Sbjct:   73 RRTVRFPHQPISAIWVADSVLDYNRRSIVVDLSKTPFALFRRDAVMMKQARTSVDPSAPLPPPGPPALSPPRLRAAAAACXXXXXXXXXRSPVGSSDAAADSDASPSPPSAERRRPGGDRLAKLWESESSESSEGHT-DLETDDTETDWHSDADDCCSVGSGTEEAPPCVVEQQQLRRGSNSEAGSPAFYGVWKRTSSEGYEELLLSSGVPKRAVAMAMKKHPVHIIDHDGSYFRLIVKNGLSKVDNTFFIGDEPKQ-DIIGKQSYEVSMNWAHLSGHGREDELALTSICHQAGEEVIAIRSLHEGGDQMVLTQIVRRPAEGYEVRAKHFFKRVTSKSELRSGGKQQHKQQKGLSSTIVTVRRKK 435          
BLAST of mRNA_L-elsbetiae_contig577.14182.1 vs. uniprot
Match: A0A835YHH8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.500e-31
Identity = 100/329 (30.40%), Postives = 144/329 (43.77%), Query Frame = 0
Query:   38 YSRRSIVVDLSKTPFALFRRDAVMMKQARSLSGSVPLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGRLWELESSESSEGHTTDLETDDTETDWHSDDADSVCSSSAES---SGCLVTEQLRRGSNSEGPAFYGVWKRTSSEGYEELLLKSGVPKRAVAVAMRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFWIGEEPKQQDTIGKKSYEVSMNWAHLSGHGSEDELALSSVC---------------------------------------HQLGEEVIAIRSLHDGGSRMVLTQIVRRPAENYEVRAKHFFKLVTSK 324
            Y RRSI VDL++TP+ALF +D  +M +    S                                                        EG ++ L  D+ E     + + S   + AE       +++ + RR      P F G+WKR+  EG+ ELL  SGVP++A   A +K PVHIIDHD  YFRLI+KNGL K D  + IG+EP+ + + G   YEV ++W H + +G  + L L+S+                                             E+IA+R+L DGG  +VL QIVR+PA   E RA+H FK +T++
Sbjct:  116 YDRRSIKVDLTRTPYALFHKDYYLMNRPAEYSPK--------------------------------------------------HTGKEGRSSSLSDDEEELHTEGEGSSSDDEARAEEVVRQKRMISLERRRALR---PNFSGIWKRSRIEGFIELLAFSGVPRKAALAAAQKRPVHIIDHDDDYFRLIIKNGLVKSDAHYIIGDEPRIEKS-GATDYEVVLDWGHGTANGRAESLVLTSISVNAKTGGSDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAIEMIAVRTLEDGGDVLVLQQIVRKPATGEEARARHIFKRITAR 390          
BLAST of mRNA_L-elsbetiae_contig577.14182.1 vs. uniprot
Match: A0A836CAN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN9_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.230e-24
Identity = 68/159 (42.77%), Postives = 89/159 (55.97%), Query Frame = 0
Query:  164 QLRRGSNSEGPAFYGVWKRTSSEGYEELLLKSGVPKRAVAVAMRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFWIGEEPKQQDTIGKKSYEVSMNWAHLSGHGSEDELALSSVCHQLGEEVIAIRSLHDGGSRMVLTQIVRRPAENYEVRAKHFFKLVT 322
            +LRR + +  P F GVWKR   EG+ ELL  SGVP++A   A ++  VHIIDHD  YFRLIVKNGL+KVD  +           I K  +                   +++    L  E+IA+R+L DGG+ +VL QIVRRPA   E RA+H FK +T
Sbjct:  118 ELRRRAAAARPDFSGVWKRARVEGFIELLAFSGVPRKAALSAAQRRAVHIIDHDDDYFRLIVKNGLTKVDGHY----------IIEKLKFXXXXXXXXXXXX-------IAAAAAPL--EMIAVRTLEDGGATLVLQQIVRRPATGEEARARHIFKRLT 257          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig577.14182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G864_ECTSI1.430e-13768.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHH8_9STRA1.500e-3130.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CAN9_9STRA2.230e-2442.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012674CalycinGENE3D2.40.128.20coord: 153..320
e-value: 2.8E-11
score: 45.6
IPR012674CalycinSUPERFAMILY50814Lipocalinscoord: 175..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig577contigL-elsbetiae_contig577:24370..27475 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig577.14182.1mRNA_L-elsbetiae_contig577.14182.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig577 24370..27475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig577.14182.1 ID=prot_L-elsbetiae_contig577.14182.1|Name=mRNA_L-elsbetiae_contig577.14182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=350bp
ESSSACCGGGDGKTGRKAVRFSSVLISDIWQADSADVYSRRSIVVDLSKT
PFALFRRDAVMMKQARSLSGSVPLPPPAPPALPPQQAVCPPSQELPSSSP
SSSPPPSLRRRSGGRLWELESSESSEGHTTDLETDDTETDWHSDDADSVC
SSSAESSGCLVTEQLRRGSNSEGPAFYGVWKRTSSEGYEELLLKSGVPKR
AVAVAMRKHPVHIIDHDGSYFRLIVKNGLSKVDNTFWIGEEPKQQDTIGK
KSYEVSMNWAHLSGHGSEDELALSSVCHQLGEEVIAIRSLHDGGSRMVLT
QIVRRPAENYEVRAKHFFKLVTSKAELRDTGREQKQQLSSTVVTVRRQK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin