prot_L-elsbetiae_contig5759.14165.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5759.14165.1
Unique Nameprot_L-elsbetiae_contig5759.14165.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length128
Homology
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BLAST of mRNA_L-elsbetiae_contig5759.14165.1 vs. uniprot
Match: D7G4S8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S8_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 3.650e-35
Identity = 69/90 (76.67%), Postives = 75/90 (83.33%), Query Frame = 0 
Query:   37 AGRKVGPGYNLDDFELVEEGTGDDGSWDDYGDFTDDPGEYSKPRGADTAYVEDLGTELKVTTTGTGGGFSAATPSDVVFSADPNLTPVFG 126
            AG   GPGYN+DDFELVEEGTGDDG+WDDY D++DDPG Y KPRGADTAYVEDLGTELKV T G G GFSAA  +  VFSADPNL+PV G
Sbjct:  153 AGWNDGPGYNMDDFELVEEGTGDDGTWDDYSDYSDDPGLYKKPRGADTAYVEDLGTELKVMTRGGGDGFSAAPAAKTVFSADPNLSPVSG 242
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5759.14165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4S8_ECTSI3.650e-3576.67DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5759contigL-elsbetiae_contig5759:5677..7278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5759.14165.1mRNA_L-elsbetiae_contig5759.14165.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5759 5676..7278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5759.14165.1 ID=prot_L-elsbetiae_contig5759.14165.1|Name=mRNA_L-elsbetiae_contig5759.14165.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp
ARGRGRGAGAASFGQGYPGRGGGRFSGGGGRGRGRVAGRKVGPGYNLDDF
ELVEEGTGDDGSWDDYGDFTDDPGEYSKPRGADTAYVEDLGTELKVTTTG
TGGGFSAATPSDVVFSADPNLTPVFGGA
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