prot_L-elsbetiae_contig5752.14156.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5752.14156.1
Unique Nameprot_L-elsbetiae_contig5752.14156.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length107
Homology
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BLAST of mRNA_L-elsbetiae_contig5752.14156.1 vs. uniprot
Match: A0A7R9YY20_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YY20_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.170e-7
Identity = 29/64 (45.31%), Postives = 35/64 (54.69%), Query Frame = 0 
Query:   20 MCPGGVPGIPSVRGEVCCPTSCLNCGGRGCGTFPGGQGNCCIGGRNGILANSDF-CSQTMAAPC 82
             C  G+ G+ S   EVCC +SC  CGG GC  FPGG  NCC G     +A+SD  CS+     C
Sbjct:  252 FCYNGIEGVSSSGVEVCCASSCGQCGGSGCWQFPGGSANCCTG----AIASSDIVCSEFTDVGC 311
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5752.14156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7R9YY20_9STRA3.170e-745.31Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5752contigL-elsbetiae_contig5752:3864..4974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5752.14156.1mRNA_L-elsbetiae_contig5752.14156.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5752 3864..4974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5752.14156.1 ID=prot_L-elsbetiae_contig5752.14156.1|Name=mRNA_L-elsbetiae_contig5752.14156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp
ESATPDPTAATPPPVAGGEMCPGGVPGIPSVRGEVCCPTSCLNCGGRGCG
TFPGGQGNCCIGGRNGILANSDFCSQTMAAPCRIDDDPTPAPTVEVIPAP
ADEVAPA
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