prot_L-elsbetiae_contig5739.14134.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5739.14134.1
Unique Nameprot_L-elsbetiae_contig5739.14134.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length471
Homology
BLAST of mRNA_L-elsbetiae_contig5739.14134.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 353 bits (905), Expect = 6.320e-108
Identity = 191/361 (52.91%), Postives = 235/361 (65.10%), Query Frame = 0
Query:    6 AAELLKSLEIAILSVLS-TPSRARRATAGAKGKIPNPLETLKVLAADCEWSKVFGTPRGVAPAVPLPIKGEEVHDPRATMLLNPELRKTFGALWVLGDGNCLWRSVTCALWGTDEFWCQLKLVVLGWSSLNVDALVGTGGPL--HYNDIHYEGHIYKKHVVRGADGKHDHRDDDYRSMLLENIAWFCKDKRWAGDLSLLLVAECLGVVTKMPIPTDMLGRKKKDAPSESPPRDTS-------TMDDKRYSRQYIPTGGLKGIVLRGSSGESDIAVEEIAVTVTNGEGGVVGDRALCGIPTIMADTELGTLLHYAAIVSTDPDQHVRRPLPMAEVAPPLWSKFDETVARDTASERLEWEKRQ 356
            A+  L  L  A L V++ T  RARR  AGAKG+IP+  E L+ +AA+C W KVFGTP GV P V  P KG+E++DP+ATM+L PELRKTF ALWV GDGNC WRS+  ALWGTDE+W QLKL VL WS++NV+ALVG GG L      IHY+  I+ KH+ RG DGK DHR DD  SMLLE+IA F  +++W G L+ +L  E  G+V KMP P DM  R + D    +     S          D RYS   +PT G K I+LRG S E DI VEEIA+T+ + +  VVGD +L  IP I ADT L  L H+AAIV  DPD HVRRP PM++  PPL +KFD++ A   A E  EW +RQ
Sbjct:   13 ASRNLSRLGSAALGVVNNTSQRARRENAGAKGRIPSQREYLRAIAAECTWPKVFGTPEGVVPTVARPGKGQEMYDPKATMILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLAVLAWSAVNVEALVGEGGALFGRAGIIHYDDEIHAKHIYRGPDGKVDHRLDDDASMLLESIAKFSANRQWGGCLAGVLFTERTGLVLKMPHPFDMRARIRADTSGAAAKATASYGGGSEDEFGDHRYSFTKVPTAGRKEIILRGVSDEEDIVVEEIAITMASYDSAVVGDGSLSDIPVIEADTNLNHLNHFAAIVCADPDVHVRRPFPMSKAGPPLHAKFDKSDAERRAKEEAEWAERQ 373          
BLAST of mRNA_L-elsbetiae_contig5739.14134.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 2.350e-25
Identity = 84/269 (31.23%), Postives = 127/269 (47.21%), Query Frame = 0
Query:   96 ALWVLGDGNCLWRSVTCALWGTDEFWCQLKLVVLGWSSLNVDALVGTGGPLHYNDIHYE-------GHIYKKHVVRGADGKHDHRDDDYRSMLLENIAWFCKDKRWAGDLSLLLVAECLGVVTKMPIPTDMLGRKKKDAPSESPP------RDTSTMDDKRYSRQYIPTGGLKGIVLRGSSGESDIAVEEIAVTVTNGEGGVVGDRALCGIPTIMADTELGTLLHYAAIVSTDPDQHVRRPLPMAEVAPPLWSKFDETVARDTASERLE 351
            ALWV GDGNC WRS+   LW +DE+W QLKLVVL W++ + + LV  G  L    +H+        G+ Y    V  A             MLL ++A+ C+D  W GD +LLL ++ L +  K+  P D++ RK+ D  S +P       R    +DD R S+ ++    +  + ++G  G   +A   + +T   G+  V     L  +  +   T     +H+AA+   D       P P+   APPL+    +  ARD    RLE
Sbjct:    8 ALWVRGDGNCCWRSLAKCLWESDEYWSQLKLVVLAWAAAHAEELVSEGRVLSDFSLHFSDDIHAGLGYAYSATCVGAAPSV-----AQTSRMLLASVAYDCEDTVWGGDFTLLLASQALKITVKLLSPNDVMVRKR-DESSATPGTIRGAGRKGDKVDDTRLSQTFLADDAVSCLHIQG--GGRMVAEATVVLTSCTGQASV---GELDNLVEVTKSTACPRGVHFAAVSKKD---RSTPPFPLVRAAPPLFQALAKQ-ARDAERLRLE 261          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5739.14134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE6.320e-10852.91SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K454_9PHAE2.350e-2531.23SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 347..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5739contigL-elsbetiae_contig5739:1979..4347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5739.14134.1mRNA_L-elsbetiae_contig5739.14134.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5739 1633..4347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5739.14134.1 ID=prot_L-elsbetiae_contig5739.14134.1|Name=mRNA_L-elsbetiae_contig5739.14134.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=471bp
MPGPQAAELLKSLEIAILSVLSTPSRARRATAGAKGKIPNPLETLKVLAA
DCEWSKVFGTPRGVAPAVPLPIKGEEVHDPRATMLLNPELRKTFGALWVL
GDGNCLWRSVTCALWGTDEFWCQLKLVVLGWSSLNVDALVGTGGPLHYND
IHYEGHIYKKHVVRGADGKHDHRDDDYRSMLLENIAWFCKDKRWAGDLSL
LLVAECLGVVTKMPIPTDMLGRKKKDAPSESPPRDTSTMDDKRYSRQYIP
TGGLKGIVLRGSSGESDIAVEEIAVTVTNGEGGVVGDRALCGIPTIMADT
ELGTLLHYAAIVSTDPDQHVRRPLPMAEVAPPLWSKFDETVARDTASERL
EWEKRQTQRAAQRAEAAAESAAAAAAERVARNQKESEEARAAATAAAAAA
AAAERVAGDQEGEEAPAAAAAAAAAAAAAERLARDQKEDEEVRAAATAAT
TAAAAAAKIKDKVSATAELAE
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