prot_L-elsbetiae_contig57.14083.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig57.14083.1
Unique Nameprot_L-elsbetiae_contig57.14083.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length154
Homology
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BLAST of mRNA_L-elsbetiae_contig57.14083.1 vs. uniprot
Match: D8LF02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF02_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.280e-6
Identity = 30/57 (52.63%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:   44 SREEMAESRRTRCREWIDNANTDMKSW------VREPQPSVFKHTFRDRQSDAEIGP 94
            SREEMA+S RTRC EW+DNAN DMKSW      V  P     ++  R R+   EIGP
Sbjct:   24 SREEMAQSSRTRCCEWVDNANADMKSWAKIRGRVEHPHWEPPRYFLRPREKAKEIGP 80
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig57.14083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF02_ECTSI1.280e-652.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig57contigL-elsbetiae_contig57:55673..58202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig57.14083.1mRNA_L-elsbetiae_contig57.14083.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig57 55673..58202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig57.14083.1 ID=prot_L-elsbetiae_contig57.14083.1|Name=mRNA_L-elsbetiae_contig57.14083.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp
MFSLRTQEKLDAERNQNSSREILWKHLNDKNKSGRMVRRIYNKSREEMAE
SRRTRCREWIDNANTDMKSWVREPQPSVFKHTFRDRQSDAEIGPANGHVS
SRKYIPRLVFSGGGELDKEKTADLVETLMEPSQMRGNDPKALQNPCRPTV
IVTD
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