prot_L-elsbetiae_contig569.14060.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig569.14060.1
Unique Nameprot_L-elsbetiae_contig569.14060.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length207
Homology
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BLAST of mRNA_L-elsbetiae_contig569.14060.1 vs. uniprot
Match: D7G6G6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6G6_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 2.480e-101
Identity = 170/294 (57.82%), Postives = 185/294 (62.93%), Query Frame = 0 
Query:    1 MEGVLKDGLLQLLQYFHNPELVGSLLLLYVIHVVGLTVNIPHLFLNGLKFIVAPTEEAVLRIRSDAKAPRPEPLGQLDKEGKDANAYDKMNALGLARMEISRGTVGTLMYFPHYEGMVTWSLVALGNLVIAQGSRCAIPTQ---------------------------------------------------------------------------------------RPLGWASLTLCAALLRAWWCNVRLVYLLGSGNDHSKFAALCGFCGLFAAAGAGAMFPPGFFAFDLR 207
            MEG + D LL+LL+YFHNPELVGSLLLLYV+HVVG TVNIPHLFLNGLKFIVAPT+EAVLRIRSDAK PRPEPLGQLD+EGKDANAYDKM+ALGLARME+SRGT+G LMYFP YEGMV W+++ALGN  IAQGSRCAIPTQ                                                                                       RPLGWASLTLC ALLR WWCNVRL+YLLG  ND+SKFA L GFCGLFAAA   AM PP F AFD+R
Sbjct:    1 MEGPVADALLKLLRYFHNPELVGSLLLLYVVHVVGFTVNIPHLFLNGLKFIVAPTQEAVLRIRSDAKGPRPEPLGQLDREGKDANAYDKMDALGLARMEVSRGTLGGLMYFPQYEGMVLWAVIALGNFFIAQGSRCAIPTQTKCEHRGSAKKEKSPRSGAFCTANLVHSLPSAFFDALRCPPTSSFGVPIAHLDSCLLLLPQTPFTPSFSLALFDVLLLLWRDPSGGGRPLGWASLTLCGALLRCWWCNVRLIYLLGLNNDYSKFALLSGFCGLFAAAAVAAMLPPSFLAFDVR 294
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig569.14060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6G6_ECTSI2.480e-10157.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..204
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..177
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 143..160
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig569contigL-elsbetiae_contig569:17791..23429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig569.14060.1mRNA_L-elsbetiae_contig569.14060.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig569 17777..23429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig569.14060.1 ID=prot_L-elsbetiae_contig569.14060.1|Name=mRNA_L-elsbetiae_contig569.14060.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp
MEGVLKDGLLQLLQYFHNPELVGSLLLLYVIHVVGLTVNIPHLFLNGLKF
IVAPTEEAVLRIRSDAKAPRPEPLGQLDKEGKDANAYDKMNALGLARMEI
SRGTVGTLMYFPHYEGMVTWSLVALGNLVIAQGSRCAIPTQRPLGWASLT
LCAALLRAWWCNVRLVYLLGSGNDHSKFAALCGFCGLFAAAGAGAMFPPG
FFAFDLR
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