prot_L-elsbetiae_contig5630.13972.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5630.13972.1
Unique Nameprot_L-elsbetiae_contig5630.13972.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length240
Homology
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Match: A0A6H5K543_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K543_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 1.270e-79
Identity = 126/176 (71.59%), Postives = 140/176 (79.55%), Query Frame = 0
Query:   66 STVARRRPQDGSAIAVGLFFVSLLSHAGALLQLDRVPNRITNERSATFTYVCTPIDVADGDSCDVKWSLDSSQW-EAASASTASVTVEGLIDGVHSLSLKYDYGADGRPEPESVDYTWTVDTVPPDTIVDTGPSQEGEAPRPEEEDPFLFFTFHCSEDLCQYRYQFDNNIELTAMW 240
            ST   RR +  S  AVGL     ++   ALLQLD+VP R TNERSATFTYVCTP+D  + D CDVKWSLDS+ W   A ++ ASVTVE L+DGVHSLSLK DY A+GR E ESVDYTWTVDTVPP+TIVDTGPSQ+GEAPRPEE DPFLFFTFHCSEDLC+YRYQFDN IELTA W
Sbjct:   36 STGNTRRTRRWSVAAVGLLLGCAINRVSALLQLDQVPKRTTNERSATFTYVCTPLDTTEDDGCDVKWSLDSAGWVPVALSANASVTVEDLLDGVHSLSLKNDYTANGRSETESVDYTWTVDTVPPETIVDTGPSQDGEAPRPEEADPFLFFTFHCSEDLCRYRYQFDNRIELTATW 211          
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Match: D8LBK9_ECTSI (OmpA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK9_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 1.990e-72
Identity = 124/166 (74.70%), Postives = 137/166 (82.53%), Query Frame = 0
Query:   80 AVGLFFVSLLSHAG----ALLQLDRVPNRITNERSATFTYVCTPIDVADGDSCDVKWSLDSSQW-EAASASTASVTVEGLIDGVHSLSLKYDYGADGRPEPESVDYTWTVDTVPPDTIVDTGPSQEGEAPRPEEEDPFLFFTFHCSEDLCQYRYQFDNNIELTAMW 240
            AVGL  + L+  A     ALLQLD+VPNR TNERSATFTYVCTP+D  + D CDV+WSLDS+ W   A ++ ASVTVE L+DGVHSLSLK DY ADGR E ESVDYTWTVDTVPPDTIVDTGPSQ+GEAPRPEE DPFLFFTFHCSEDLC+YRYQFDN +ELTA W
Sbjct:   16 AVGLLLLLLIGSANNRVSALLQLDQVPNRTTNERSATFTYVCTPLDTTEDDGCDVEWSLDSAVWVPVALSANASVTVEDLLDGVHSLSLKNDYTADGRSETESVDYTWTVDTVPPDTIVDTGPSQDGEAPRPEEADPFLFFTFHCSEDLCRYRYQFDNRVELTATW 181          
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Match: A0A6H5KAC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC7_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 6.790e-14
Identity = 38/66 (57.58%), Postives = 44/66 (66.67%), Query Frame = 0
Query:   66 STVARRRPQDGSAIAVGLFFVSLLSHAGALLQLDRVPNRITNERSATFTYVCTPIDVADGDSCDVK 131
            ST   RR +  S  AVGL     ++   ALLQLD+VP R TNERSATFTYVCTP+D  + D CDVK
Sbjct:   36 STGNTRRTRRWSVAAVGLLLGCAINRVSALLQLDQVPKRTTNERSATFTYVCTPLDTTEDDGCDVK 101          
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Match: A0A0H4X958_9DELT (Internalin, putative n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4X958_9DELT)

HSP 1 Score: 59.7 bits (143), Expect = 1.360e-6
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0
Query:   98 LDRVPNRITNERSATFTYVCTPIDVADGDSCDVKWSLDSSQWEAASASTASVTVEGLIDGVHSLSLKYDYGADGRPEPESVDYTWTVDTVPPDTIVDTGPS 198
            ++  P  +TN  SATF +       ++G     + SLD + +   S     VT  GL+DG H L ++    A G  +P   +YTWTVDT PPDT+V +GP+
Sbjct: 1030 IESGPALLTNATSATFEFR------SEGGGVAYECSLDGNSFAPCSNP---VTFTGLVDGAHMLMVRA-VDAAGNVDPTPAEYTWTVDTAPPDTLVVSGPA 1120          
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Match: A0A0H4WQC5_9DELT (Internalin, putative n=2 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4WQC5_9DELT)

HSP 1 Score: 57.8 bits (138), Expect = 6.020e-6
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 0
Query:   98 LDRVPNRITNERSATFTYVCTPIDVADGDSCDVKWSLDSSQWEAASASTASVTVEGLIDGVHSLSLKYDYGADGRPEPESVDYTWTVDTVPPDTIVDTGPS 198
            +D  P  IT E SATF         A+G +   + SLD + + A    T+ V+  GL DG H L L   + A G  +    +YTWTVDTV PDT++ +GP+
Sbjct: 1736 IDSGPALITRETSATFELR------AEGGAVGFECSLDGASFTAC---TSPVSYTGLADGEH-LFLVRAFDAVGNVDATPAEYTWTVDTVEPDTVIVSGPA 1826          
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Match: A0A7Y6X6Z6_9DELT (Ig-like domain repeat protein n=3 Tax=Myxococcus TaxID=32 RepID=A0A7Y6X6Z6_9DELT)

HSP 1 Score: 57.4 bits (137), Expect = 7.850e-6
Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 0
Query:   84 FFVSLLSHAGALLQLDRVPNRITNERSATFTYVCTPIDVADGDSCDVKWSLDSSQWEAASASTAS-VTVEGLIDGVHSLSLKYDYGADGRPEPESVDYTWTVDTVPPDTIVDTGPS 198
            FF+ L    G    +D  P ++T E SA+F         ++G +   + SLD     AA A+ AS +T  GL +G H L ++    A G  +P   +YTWTVDT  PDT+V +GPS
Sbjct:  780 FFIDL---TGPETFIDSGPEQLTRETSASFELR------SEGGAVGYQCSLDG----AAFATCASPLTTSGLAEGDHLLRVRA-VDAVGNVDPSPAEYTWTVDTTEPDTLVTSGPS 881          
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Match: UPI0011344B56 (hypothetical protein n=1 Tax=Stella humosa TaxID=94 RepID=UPI0011344B56)

HSP 1 Score: 57.0 bits (136), Expect = 9.150e-6
Identity = 42/139 (30.22%), Postives = 63/139 (45.32%), Query Frame = 0
Query:  106 TNERSATFTYVCTPIDVADGDSCDVKWSLDSSQWEAASASTASVTVEGLIDGVHSLSLKYDYGADGRPEPESVDYTWTV-----DTVPPDTIVDTGPSQEGEAPRPEEEDPFLFFTFHCSEDLCQYRYQFDNNIELTAM 239
            T+  +ATF +       +D +    + +LD  QW+AA AS    T  GL  G H L ++   GA G  +P    Y W++     DT+PPDT++ +GP   G+A R         F F   ED   +    D    +T +
Sbjct:  181 TDSTTATFVFS------SDEEGVRFETALDGGQWQAAGASA---TFTGLAPGDHVLLVRAIDGA-GNADPTPAIYPWSIGAPSPDTIPPDTVIQSGPPVTGDAGRD------ATFVFGSDEDQAAFEVSLDGGPYMTVL 303          
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Match: A0A3N1KUS3_9PROT (ELWxxDGT repeat protein n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1KUS3_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 9.690e-6
Identity = 42/139 (30.22%), Postives = 63/139 (45.32%), Query Frame = 0
Query:  106 TNERSATFTYVCTPIDVADGDSCDVKWSLDSSQWEAASASTASVTVEGLIDGVHSLSLKYDYGADGRPEPESVDYTWTV-----DTVPPDTIVDTGPSQEGEAPRPEEEDPFLFFTFHCSEDLCQYRYQFDNNIELTAM 239
            T+  +ATF +       +D +    + +LD  QW+AA AS    T  GL  G H L ++   GA G  +P    Y W++     DT+PPDT++ +GP   G+A R         F F   ED   +    D    +T +
Sbjct:  395 TDSTTATFVFS------SDEEGVRFETALDGGQWQAAGASA---TFTGLAPGDHVLLVRAIDGA-GNADPTPAIYPWSIGAPSPDTIPPDTVIQSGPPVTGDAGRD------ATFVFGSDEDQAAFEVSLDGGPYMTVL 517          
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Match: UPI001BB41379 (S-layer homology domain-containing protein n=1 Tax=Paenibacillus cineris TaxID=237530 RepID=UPI001BB41379)

HSP 1 Score: 54.7 bits (130), Expect = 5.470e-5
Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = 0
Query:   88 LLSHAGAL-LQLDRVPNRITNERSATFTYVCTPIDVADGDSCDVKWSLDSSQWEAASASTASVTVEGLIDGVHSLSLKYDYGADGRPEPESVDYTWTVDTVPPDTIVDTGP 197
            +L  AGAL   L   P  ITN ++ TF +       ++ +    + SLD S + + S     +T+ GL DG H+L ++   GA G  +     Y+WTVDTV PDT +D+GP
Sbjct:  182 VLVSAGALDTSLTSTPALITNGKNDTFGFS------SNNNRASYECSLDESSFFSCSNP---MTLNGLADGSHNLQVRAVDGA-GSIDLTPAGYSWTVDTVTPDTTIDSGP 282          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5630.13972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5K543_9PHAE1.270e-7971.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBK9_ECTSI1.990e-7274.70OmpA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KAC7_9PHAE6.790e-1457.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0H4X958_9DELT1.360e-636.63Internalin, putative n=1 Tax=Myxococcus hansupus T... [more]
A0A0H4WQC5_9DELT6.020e-638.61Internalin, putative n=2 Tax=Myxococcus hansupus T... [more]
A0A7Y6X6Z6_9DELT7.850e-637.07Ig-like domain repeat protein n=3 Tax=Myxococcus T... [more]
UPI0011344B569.150e-630.22hypothetical protein n=1 Tax=Stella humosa TaxID=9... [more]
A0A3N1KUS3_9PROT9.690e-630.22ELWxxDGT repeat protein n=1 Tax=Stella humosa TaxI... [more]
UPI001BB413795.470e-536.04S-layer homology domain-containing protein n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..98
NoneNo IPR availableTMHMMTMhelixcoord: 76..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5630contigL-elsbetiae_contig5630:6195..9210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5630.13972.1mRNA_L-elsbetiae_contig5630.13972.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5630 6194..9210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5630.13972.1 ID=prot_L-elsbetiae_contig5630.13972.1|Name=mRNA_L-elsbetiae_contig5630.13972.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=240bp
GGWEQRRQAKTDSLKTGSGRMPEAFVPARRCRRLPSHAKAGNGSPRSIFM
SKESDVGRNPSTSLASTVARRRPQDGSAIAVGLFFVSLLSHAGALLQLDR
VPNRITNERSATFTYVCTPIDVADGDSCDVKWSLDSSQWEAASASTASVT
VEGLIDGVHSLSLKYDYGADGRPEPESVDYTWTVDTVPPDTIVDTGPSQE
GEAPRPEEEDPFLFFTFHCSEDLCQYRYQFDNNIELTAMW
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