prot_L-elsbetiae_contig5630.13971.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5630.13971.1
Unique Nameprot_L-elsbetiae_contig5630.13971.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length152
Homology
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: D8LBK9_ECTSI (OmpA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK9_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.100e-68
Identity = 125/142 (88.03%), Postives = 135/142 (95.07%), Query Frame = 0
Query:    5 DGALVVLMLGSPEVDSGTGNTVFSLSAEIEVPDLIELNST-LRVEVSTNSSVILASASLEESMTSKEWLRWPYASELPGSHMVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTSTDTAFFSFACALPGAEAAPS 145
            +GALVVL+LGSPEVDSGTG+TVFSLSAE+EVPDLI LNST L VEVSTNSSV+LASA+LEE++TSKEWLRWPYASELPGSH VAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVT+ DTAFFSFACALP +EA PS
Sbjct:  286 EGALVVLVLGSPEVDSGTGDTVFSLSAEVEVPDLIGLNSTSLVVEVSTNSSVLLASAALEEAITSKEWLRWPYASELPGSHTVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPS 427          
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: A0A6H5K857_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K857_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.220e-36
Identity = 71/77 (92.21%), Postives = 73/77 (94.81%), Query Frame = 0
Query:   70 EWLRWPYASELPGSHMVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTSTDTAFFSFACALPGAEAAPSP 146
            EWLRWPYASELPGSH VAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVT+ DTAFFSFACALP +EA PSP
Sbjct:   21 EWLRWPYASELPGSHTVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSP 97          
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: F8CLT6_MYXFH (OmpA domain-containing protein n=3 Tax=Myxococcaceae TaxID=31 RepID=F8CLT6_MYXFH)

HSP 1 Score: 58.9 bits (141), Expect = 3.280e-7
Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   75 PYASELPGSHMVAIAAVDEAGNVDPEPAVWTWSVDAR-PRTSLTSAPQAVTSTDTAFFSF 133
            PY     G H +A+ AVD AGNVDP PAV TW+VDA  P T++ S P AVT+  TA F F
Sbjct:  849 PYTGLGDGEHTLAVYAVDAAGNVDPTPAVRTWTVDATAPETTIVSGPPAVTNATTATFDF 908          
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: A0A6H5K543_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K543_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.950e-6
Identity = 27/31 (87.10%), Postives = 31/31 (100.00%), Query Frame = 0
Query:    5 DGALVVLMLGSPEVDSGTGNTVFSLSAEIEV 35
            +GALVVL+LGSPEVDSGTG+TVFSLSAE+EV
Sbjct:  318 EGALVVLVLGSPEVDSGTGDTVFSLSAEVEV 348          
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: A0A2V6VDH4_9BACT (Ig-like domain-containing protein (Fragment) n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6VDH4_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 3.620e-6
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 0
Query:   76 YASELPGSHMVAIAAVDEAGNVDPEPAVWTWSVDAR-PRTSLTSAPQAVTSTDTAFFSFACALPG 139
            Y++   GSH   + AVD AGNVDP PA +TW++D   P T++T+AP A+T++ +A FSF     G
Sbjct:  806 YSALAAGSHTFQVRAVDTAGNVDPTPASFTWTIDTTAPDTTITAAPPALTNSTSASFSFTATKTG 870          
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: A0A0H4X958_9DELT (Internalin, putative n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4X958_9DELT)

HSP 1 Score: 55.5 bits (132), Expect = 5.210e-6
Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 0
Query:   82 GSHMVAIAAVDEAGNVDPEPAVWTWSVD-ARPRTSLTSAPQAVTSTDTAFFSFACALPG 139
            G+HM+ + AVD AGNVDP PA +TW+VD A P T + S P   TS  TA F F  + PG
Sbjct: 1080 GAHMLMVRAVDAAGNVDPTPAEYTWTVDTAPPDTLVVSGPATPTSQSTASFEFESSEPG 1138          
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: UPI001F08862D (Ig-like domain-containing protein n=1 Tax=Pyxidicoccus caerfyrddinensis TaxID=2709663 RepID=UPI001F08862D)

HSP 1 Score: 55.1 bits (131), Expect = 7.150e-6
Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   82 GSHMVAIAAVDEAGNVDPEPAVWTWSVDARPR-TSLTSAPQAVTSTDTAFFSF 133
            G+H +A+ AVD AGNVDP PA + W+VD  P  TS+ S P AVTS+ +A F F
Sbjct:  674 GNHTLAVRAVDAAGNVDPTPATYAWTVDLTPPDTSIVSGPAAVTSSTSATFDF 726          
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: UPI001F50C2B8 (Ig-like domain-containing protein n=2 Tax=Pyxidicoccus sp. SCPEA002 TaxID=2813578 RepID=UPI001F50C2B8)

HSP 1 Score: 55.1 bits (131), Expect = 7.150e-6
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   82 GSHMVAIAAVDEAGNVDPEPAVWTWSVDARPR-TSLTSAPQAVTSTDTAFFSFA---------CALPGA 140
            G+H +A+ AVD AGNVDP PA ++W++D  P  T++ S P AVTS+ +A F F+         C+L GA
Sbjct:  871 GNHTLAVRAVDAAGNVDPTPATYSWTIDTTPPDTAIVSGPSAVTSSTSATFDFSSPDSPVTYECSLDGA 939          
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: UPI001F1BC852 (Ig-like domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F1BC852)

HSP 1 Score: 54.7 bits (130), Expect = 9.650e-6
Identity = 34/75 (45.33%), Postives = 42/75 (56.00%), Query Frame = 0
Query:   76 YASELPGSHMVAIAAVDEAGNVDPEPAVWTWSVDA-RPRTSLTSAPQAVTSTDTAFFSFA---------CALPGA 140
            Y S   G H +A+ AVD AGNVDP PA +TW+VD   P T++ S P   T++  A F FA         CAL GA
Sbjct:  669 YTSLSQGPHTLAVRAVDTAGNVDPTPATYTWTVDTVAPDTTIVSGPSGTTASANASFGFASNEAGVTYQCALDGA 743          
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Match: UPI001F0823DD (Ig-like domain-containing protein n=1 Tax=Pyxidicoccus trucidator TaxID=2709662 RepID=UPI001F0823DD)

HSP 1 Score: 53.5 bits (127), Expect = 2.430e-5
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   82 GSHMVAIAAVDEAGNVDPEPAVWTWSVD-ARPRTSLTSAPQAVTSTDTAFFSF 133
            G+H +A+ AVD AGNVDP PA + W+VD A P T++ S P  VT + TA F F
Sbjct:  709 GNHTLAVRAVDAAGNVDPTPATYAWTVDTALPDTTIVSGPSGVTVSTTATFDF 761          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5630.13971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LBK9_ECTSI2.100e-6888.03OmpA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K857_9PHAE1.220e-3692.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F8CLT6_MYXFH3.280e-755.00OmpA domain-containing protein n=3 Tax=Myxococcace... [more]
A0A6H5K543_9PHAE2.950e-687.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V6VDH4_9BACT3.620e-646.15Ig-like domain-containing protein (Fragment) n=1 T... [more]
A0A0H4X958_9DELT5.210e-652.54Internalin, putative n=1 Tax=Myxococcus hansupus T... [more]
UPI001F08862D7.150e-654.72Ig-like domain-containing protein n=1 Tax=Pyxidico... [more]
UPI001F50C2B87.150e-644.93Ig-like domain-containing protein n=2 Tax=Pyxidico... [more]
UPI001F1BC8529.650e-645.33Ig-like domain-containing protein n=1 Tax=Myxococc... [more]
UPI001F0823DD2.430e-552.83Ig-like domain-containing protein n=1 Tax=Pyxidico... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.650coord: 42..111
e-value: 1.9E-5
score: 26.6
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 45..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5630contigL-elsbetiae_contig5630:794..4672 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5630.13971.1mRNA_L-elsbetiae_contig5630.13971.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5630 792..4672 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5630.13971.1 ID=prot_L-elsbetiae_contig5630.13971.1|Name=mRNA_L-elsbetiae_contig5630.13971.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp
VATGDGALVVLMLGSPEVDSGTGNTVFSLSAEIEVPDLIELNSTLRVEVS
TNSSVILASASLEESMTSKEWLRWPYASELPGSHMVAIAAVDEAGNVDPE
PAVWTWSVDARPRTSLTSAPQAVTSTDTAFFSFACALPGAEAAPSPPEHS
TL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014756Ig_E-set