prot_L-elsbetiae_contig5623.13964.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5623.13964.1
Unique Nameprot_L-elsbetiae_contig5623.13964.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length561
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5623.13964.1 vs. uniprot
Match: A0A6H5KJQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ3_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 7.090e-26
Identity = 97/113 (85.84%), Postives = 105/113 (92.92%), Query Frame = 0 
Query:    1 MAEPDAEALRKELTMVKDKAKAYIGKLNEEKAALAKELNDKSTVLAGXXXXXXXXXXXXXXXXXXXXXXXXDQVKDRDGRLLRAKELLQSKLASKDQELEVARAEAKTLKEQA 113
            MAEPDA ALRKEL MVKDKAKAYI KLNEEKAALAKEL DKS VLA XXXXXXXXXXXXXXXXXXXXXXX DQVKDRDGRLLRA+ELLQ+KLA+KD+EL+ A+AEAKTL++QA
Sbjct:    1 MAEPDAAALRKELAMVKDKAKAYISKLNEEKAALAKELQDKSNVLAXXXXXXXXXXXXXXXXXXXXXXXXEDQVKDRDGRLLRAEELLQAKLAAKDEELQAAQAEAKTLRDQA 113
[Close]
BLAST of mRNA_L-elsbetiae_contig5623.13964.1 vs. uniprot
Match: D8LSM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM5_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 4.690e-20
Identity = 86/99 (86.87%), Postives = 93/99 (93.94%), Query Frame = 0 
Query:   15 MVKDKAKAYIGKLNEEKAALAKELNDKSTVLAGXXXXXXXXXXXXXXXXXXXXXXXXDQVKDRDGRLLRAKELLQSKLASKDQELEVARAEAKTLKEQA 113
            MVKDKAK YI KLNEEKAALAKEL DKS VLAG XXXXXXXXXXXXXXXXXXXXXXXDQVKDRDGRLLRAKELLQ+KLA+KD+EL+ A+AEAKTL++QA
Sbjct:    1 MVKDKAKTYISKLNEEKAALAKELQDKSNVLAGVXXXXXXXXXXXXXXXXXXXXXXXDQVKDRDGRLLRAKELLQAKLAAKDEELQAAQAEAKTLRDQA 99
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5623.13964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJQ3_9PHAE7.090e-2685.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSM5_ECTSI4.690e-2086.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 539..559
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableCOILSCoilCoilcoord: 217..237
NoneNo IPR availableCOILSCoilCoilcoord: 453..473
NoneNo IPR availableCOILSCoilCoilcoord: 410..444
NoneNo IPR availableCOILSCoilCoilcoord: 141..200
NoneNo IPR availableCOILSCoilCoilcoord: 271..316
NoneNo IPR availableCOILSCoilCoilcoord: 17..37
NoneNo IPR availableCOILSCoilCoilcoord: 85..119
NoneNo IPR availableCOILSCoilCoilcoord: 510..530

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5623contigL-elsbetiae_contig5623:1826..9802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5623.13964.1mRNA_L-elsbetiae_contig5623.13964.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5623 1689..9802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5623.13964.1 ID=prot_L-elsbetiae_contig5623.13964.1|Name=mRNA_L-elsbetiae_contig5623.13964.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=561bp
MAEPDAEALRKELTMVKDKAKAYIGKLNEEKAALAKELNDKSTVLAGVKD
KTKAYLEKLSKEKAAAVAALEDQVKDRDGRLLRAKELLQSKLASKDQELE
VARAEAKTLKEQAESAAAAASDIPKANGSSNAAGKPAESAQAAAEAEAKS
MKEELQGVREALEAAESSRTKAENLLAETNQAAEAAEAAASERAAAAEEK
RDSSCARAEALEASLAAAAHEATVEELRSRLADSEAARETRAESGAAELE
SAAAAEAQAEESEAAESARREDALRAQVAGMESELGGLREELSVAKQEKE
AAVAAAEAAVAAATKAEAAAAAAAEATAEAAAAATADATAEATATTATAE
AATAEAAAAATAVSNEDTSEKEELGEEGGEPGAASNDPAVDETTADNGDD
GSAPADESGAEEGEAAALALASRVAALEEELEASKLALRRAEEATEGAVA
AASSAAQEEVQAVRERLGAAERETAEVSLELTREKEAAVAAVAAATAVTA
AAEATMRERLGAAERETAELSLELTREKEAAAAAAAAAAAEADGARSAAR
DEAEKAREQAL
back to top