prot_L-elsbetiae_contig5619.13952.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig5619.13952.1
Unique Name	prot_L-elsbetiae_contig5619.13952.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	199

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig5619.13952.1 vs. uniprot
Match: A0A6H5KQ12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ12_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.070e-28
Identity = 81/180 (45.00%), Postives = 96/180 (53.33%), Query Frame = 0

Query:    1 MRTDIIWPVVWGTCFVGGVILGSTGPVNVLAFGSSSPKLRGSEQVAEKVS---ENMVEQRRLLQLQQDDGIFAQARNVTAAASAP----------------IIPATAPTTPRALGSS---DFDADFGEGR--QAETGGSVYGGP-STVAQRVHALNGGLWGPNEEEEQEIALELARLREE 155
            MR DI W  VW +CF+GGVILGSTGP   LAFGSSSP LRGS  +  K S   E +V        Q+ D   A  +++ A+ S                      T PT  R+LGS    D D+   E      E   S YG P S +AQR++ LNGGLWGP EEEE+EIA ELA LREE
Sbjct:    1 MRADIFWSAVWSSCFIGGVILGSTGPAKTLAFGSSSPSLRGSSSIQSKPSQPSETIV--------QRKDETVAAEKDIKASISTKQXXXXXXXXXXXXXXXXXSITPPTKNRSLGSEPDGDLDSSLDESLVDDNEPSLSAYGLPRSKIAQRLNRLNGGLWGPTEEEEREIAKELAALREE 172

[Close]

BLAST of mRNA_L-elsbetiae_contig5619.13952.1 vs. uniprot
Match: D7G7B9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B9_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.670e-28
Identity = 80/182 (43.96%), Postives = 94/182 (51.65%), Query Frame = 0

Query:    1 MRTDIIWPVVWGTCFVGGVILGSTGPVNVLAFGSSSPKLRGSEQVAEKVSENMVEQRRLLQLQQDDGIFAQARNVTAAA------SAPI----------------IPATAPTTP----RALGSSDFDADFGEGRQAETGGSVYGGP-STVAQRVHALNGGLWGPNEEEEQEIALELARLREE 155
            MR DI W  VW +CF+GGVILGSTGP N LAFGSSSP LRGS     K SE  V+++       D+ + A+   +           API                  A A  TP    R+LG  D   D       +   S YG P S +AQR+  LNGGLWGP EEEE+EIA ELA LREE
Sbjct:    1 MRADIFWSAVWSSCFIGGVILGSTGPANTLAFGSSSPSLRGSSSAQTKPSETTVQRK-------DETVAAEKEMINEXXXXXXEIKAPISSKQXXXXXXXXXXXXXDAAASITPTTKNRSLGDLDSSLDESLLDDEQPSLSAYGLPRSKIAQRIKRLNGGLWGPTEEEEKEIAKELAALREE 175

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig5619.13952.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig5619.13952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KQ12_9PHAE	1.070e-28	45.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7B9_ECTSI	1.670e-28	43.96	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 33..198
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..32
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig5619	contig	L-elsbetiae_contig5619:4806..7044 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig5619.13952.1	mRNA_L-elsbetiae_contig5619.13952.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig5619 4258..8035 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig5619.13952.1 ID=prot_L-elsbetiae_contig5619.13952.1|Name=mRNA_L-elsbetiae_contig5619.13952.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=199bp
MRTDIIWPVVWGTCFVGGVILGSTGPVNVLAFGSSSPKLRGSEQVAEKVS
ENMVEQRRLLQLQQDDGIFAQARNVTAAASAPIIPATAPTTPRALGSSDF
DADFGEGRQAETGGSVYGGPSTVAQRVHALNGGLWGPNEEEEQEIALELA
RLREEAFRAPITSSSEGEGRQDNFSFNFSYDFEAGGTSFSYDYEFPQY*