prot_L-elsbetiae_contig5604.13936.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5604.13936.1
Unique Nameprot_L-elsbetiae_contig5604.13936.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length281
Homology
BLAST of mRNA_L-elsbetiae_contig5604.13936.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 9.250e-74
Identity = 145/169 (85.80%), Postives = 149/169 (88.17%), Query Frame = 0
Query:   69 MSRHCVSVLLLVCIAQACLAFVPSWTATSRSSRSQPPASTPAAATFSLSQPSGAICPVFGACGACGAHTFYPVRGITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXEETAEVVKKIDGIEAAIAGGSRYLGMTDPEALLKQLGRKEDE 237
            MSR+CVSVLLLV IAQACLAFVPSWTAT RSSRSQPPASTPAAATFSLSQPSG ICPVFGAC  CGA  FYPV G+TSLSAMSEG EEEGGGDH AREAADGSPAADEIRAVQXXXXXXXXXXXXXX          DGIEAAIAGGSRYLGMTDPEALLKQLGRKE++
Sbjct:    1 MSRNCVSVLLLVGIAQACLAFVPSWTATFRSSRSQPPASTPAAATFSLSQPSGPICPVFGACDTCGAQFFYPVPGMTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXXTDGIEAAIAGGSRYLGMTDPEALLKQLGRKEEQ 169          
BLAST of mRNA_L-elsbetiae_contig5604.13936.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 6.320e-45
Identity = 115/148 (77.70%), Postives = 122/148 (82.43%), Query Frame = 0
Query:  144 ITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXX-------EETAEVVKKIDGIEAAIAGGSRYLGMTDPEALLKQLGRKEDEKEQLRREKEQ----------LRELLLKKEDRLSRIEQLRANNAPAGI 274
            +TS SAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXX       EETAEVVKKID IEAAIAGGS+YLGMTDPEALLKQLGRKE   EQLRR++ +             +LLKKEDRLSRIEQLRANNAPAG+
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKE---EQLRRKEGKEXXXXXXXXXXXXILLKKEDRLSRIEQLRANNAPAGV 145          
BLAST of mRNA_L-elsbetiae_contig5604.13936.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 2.600e-43
Identity = 99/144 (68.75%), Postives = 104/144 (72.22%), Query Frame = 0
Query:  144 ITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXEETAEVVKKIDGIEAAIAGGSRYLGMTDPEALLKQLGRKEDE---------------KEQLRREKEQLRELLLKKEDRLSRIEQLRANNAPA 272
            +TSLSAMSEGDEEEGGGDHDAREAAD  PAADEIRAVQ         X    +ETAEVVKKID IEAAIAGGSRYLGMTDPEALLKQLGRKE++               +E L      L ELLLKKEDR SRIEQLRANNAPA
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRGVERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQXXXXXXXXXXXXXXXRELL------LNELLLKKEDRFSRIEQLRANNAPA 138          
BLAST of mRNA_L-elsbetiae_contig5604.13936.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 2.980e-42
Identity = 98/156 (62.82%), Postives = 100/156 (64.10%), Query Frame = 0
Query:  138 FYPVRGITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXEETAEVVKKIDGIEAAIAGGSRYLGMTDPEALLKQLGRKEDEKEQLRREKEQLR---------------------ELLLKKEDRLSRIEQLRANNAPA 272
            FYPVRG+T LSAMSEGDEEEGGGDH AREAAD  PAADEIRAVQ              EETAEVVKKID IEAAIAGG+RYLGMTDPEALLKQL       EQLRR                           ELLLK EDRLSR EQ RANNAPA
Sbjct:    2 FYPVRGMTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRGVERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQL-------EQLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLLKTEDRLSRSEQFRANNAPA 150          
BLAST of mRNA_L-elsbetiae_contig5604.13936.1 vs. uniprot
Match: D7G3Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 1.010e-34
Identity = 98/143 (68.53%), Postives = 104/143 (72.73%), Query Frame = 0
Query:  139 YPVRGITSLSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQXXXXXXXXXXXXXXEETAEVVKKIDGIEAA-IAGGSRYLGMTDPEALLKQLGRKEDEKEQLRREKEQLRELLLKKEDRLSRIEQLRANNAPAGIEASHYV 280
            YPVRGITSLSA+SEG+EE+GGGDHD REAA GSPAADEIRAVQXXXXXXXXXXXXXX        KID +EAA IAGGS YLGMTDPEALLK+  R                  +L KE RL  IEQ RANNAPAG EASHYV
Sbjct:    3 YPVRGITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXXXXKIDDVEAATIAGGSGYLGMTDPEALLKEKERLGXXXXXXXXXXXXXXXQVLVKEKRLFSIEQRRANNAPAGTEASHYV 145          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5604.13936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FM56_ECTSI9.250e-7485.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G515_ECTSI6.320e-4577.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8Q1_ECTSI2.600e-4368.75Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D8LPP1_ECTSI2.980e-4262.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Q8_ECTSI1.010e-3468.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 227..268
NoneNo IPR availableCOILSCoilCoilcoord: 177..211
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..72
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5604contigL-elsbetiae_contig5604:8514..9356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5604.13936.1mRNA_L-elsbetiae_contig5604.13936.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5604 6742..10189 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5604.13936.1 ID=prot_L-elsbetiae_contig5604.13936.1|Name=mRNA_L-elsbetiae_contig5604.13936.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=281bp
MHQVSSIGAAPVGGNGRRKSNPPGGIVNVATNNPRTPFLEKGVLNAKKRK
HRRRRTPTKRSEESIGFKMSRHCVSVLLLVCIAQACLAFVPSWTATSRSS
RSQPPASTPAAATFSLSQPSGAICPVFGACGACGAHTFYPVRGITSLSAM
SEGDEEEGGGDHDAREAADGSPAADEIRAVQDEIRGVEHKIEGAEEETAE
VVKKIDGIEAAIAGGSRYLGMTDPEALLKQLGRKEDEKEQLRREKEQLRE
LLLKKEDRLSRIEQLRANNAPAGIEASHYV*
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