prot_L-elsbetiae_contig5600.13930.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5600.13930.1
Unique Nameprot_L-elsbetiae_contig5600.13930.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length221
Homology
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BLAST of mRNA_L-elsbetiae_contig5600.13930.1 vs. uniprot
Match: A0A6H5K415_9PHAE (DUF4042 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K415_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 9.450e-55
Identity = 131/242 (54.13%), Postives = 148/242 (61.16%), Query Frame = 0 
Query:    1 CRWNCCIALGVVLSAPGVQARVAEATWAPNLMRSLRRAVVEDSHLKVRTHAAHALRTVRDARRAYGDQLPPILGGSLRGLRACRQRSVVADPTQMRYIGDLEAALLSLVLHILLALVL--DGHASAASELAATAIAPAGAGATAAPLLAEYADELLE---------------LLSSPEADTALRASELLPHYHHRYRQTGASLLVA-----AEGVPRQAGDGGGSGGVEGLREEADSTSCFP 220
            CRWNCCIALGVVLSA GVQAR A A WAP LM+SL RAV++D+HLKVRTHAAHAL+ V DAR AYGDQLP ILGG LRGL AC+ RS+VAD TQMRY GDLE AL SLVLHIL+ALV   D  +S+AS       A  G       LL EYAD                   +LSSPE+DTAL  SEL P+Y  R       L +      A+ +P+Q G      G   L EE  S S  P
Sbjct: 1345 CRWNCCIALGVVLSARGVQARAARAQWAPVLMQSLGRAVLDDNHLKVRTHAAHALKAVLDAR-AYGDQLPSILGGCLRGLDACKNRSIVADSTQMRYAGDLEVALRSLVLHILIALVALGDDASSSASAGKPGDAADCGGXXXXXXLLGEYADXXXXXXXXXXXXXXXXXXGVLSSPESDTALSPSELSPYYRPRXXXXXXRLPIENFQLMAQNIPQQDGRNQQDKGA--LGEEMTSASFQP 1583
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BLAST of mRNA_L-elsbetiae_contig5600.13930.1 vs. uniprot
Match: D7FH12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH12_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 9.930e-40
Identity = 97/169 (57.40%), Postives = 112/169 (66.27%), Query Frame = 0 
Query:   37 RAVVEDSHLKVRTHAAHALRTVRDARRAYGDQLPPILGGSLRGLRACRQRSVVADPTQMRYIGDLEAALLSLVLHILLALVLDGHASAASELAATAIAPAGAGAT----AAPLLAEYADELLELLSSPEADTALRASELLPHYHHRYRQTGASL---LVAAEGVPRQAG 198
            RAV++D+HLKVRTHAAHAL+ V DAR AYGDQLP ILGG LRGL AC+ RSVVADPTQMRY GDLE AL SLVLHIL+ALV  G  ++                     +A LL EYADELLE+LSSPE+D AL  SEL P+Y  R R+    +      A G+P Q G
Sbjct: 1271 RAVLDDNHLKVRTHAAHALKAVLDAR-AYGDQLPSILGGCLRGLAACKSRSVVADPTQMRYAGDLEVALRSLVLHILIALVALGDDASXXXXXXXXXXXXXXXXXXXXPSAALLGEYADELLEVLSSPESDAALSPSELSPYYRPRPRRRRLPIEDFQSVARGIPHQDG 1438
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5600.13930.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K415_9PHAE9.450e-5554.13DUF4042 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FH12_ECTSI9.930e-4057.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13366MALARIA ANTIGEN-RELATEDcoord: 2..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..221
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.739

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5600contigL-elsbetiae_contig5600:8129..11012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5600.13930.1mRNA_L-elsbetiae_contig5600.13930.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5600 8129..11012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5600.13930.1 ID=prot_L-elsbetiae_contig5600.13930.1|Name=mRNA_L-elsbetiae_contig5600.13930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=221bp
CRWNCCIALGVVLSAPGVQARVAEATWAPNLMRSLRRAVVEDSHLKVRTH
AAHALRTVRDARRAYGDQLPPILGGSLRGLRACRQRSVVADPTQMRYIGD
LEAALLSLVLHILLALVLDGHASAASELAATAIAPAGAGATAAPLLAEYA
DELLELLSSPEADTALRASELLPHYHHRYRQTGASLLVAAEGVPRQAGDG
GGSGGVEGLREEADSTSCFPP
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