prot_L-elsbetiae_contig5584.13902.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5584.13902.1
Unique Nameprot_L-elsbetiae_contig5584.13902.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length237
Homology
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.190e-87
Identity = 138/143 (96.50%), Postives = 142/143 (99.30%), Query Frame = 0
Query:   94 AVSHAAAEEISNMEDVPKLKEPVAISDFEALDIRVGRIVLAELVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLSSSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 236
            AVSHAAAEEISNMEDVPKLK+PVAI+DFEALDIRVGRIVLAEL+PDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGK+LS SNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL
Sbjct:    4 AVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146          
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.790e-58
Identity = 98/143 (68.53%), Postives = 117/143 (81.82%), Query Frame = 0
Query:   94 AVSHAAAEEISNMEDVPKLKEPVAISDFEALDIRVGRIVLAELVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLSSSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 236
            AVS A  EE ++  DVP L+  V+++ +EALDIRVGRIV AE VPDPDHGNKPSRKYLSLVV LGNE R ++S VR + DVE+AIGK+VL+ AN EEE ILG PSRG++L ++N+SK PMPRTLRTVLLGGG VPPGS V+GL
Sbjct:   17 AVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159          
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP)

HSP 1 Score: 152 bits (384), Expect = 1.440e-42
Identity = 76/138 (55.07%), Postives = 110/138 (79.71%), Query Frame = 0
Query:   99 AAEEISNME--DVPKLKEPVAISDFEALDIRVGRIVLAELVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLSSSNFSKEPMPRTLRTVLLGGGGVPPGSAVS 234
            A +E  N++  D+P +K+ V+ +  ++LDIRVGRI  A+L+PDP+H  KPSRKYL L+V++G EKR +V+A R I DVE++IG++VL+A NVE++T+LG+ S G++LS+SN ++ P+PRTLRTVL  GGG+PPGS VS
Sbjct:   67 AVDEEDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204          
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA)

HSP 1 Score: 100 bits (250), Expect = 1.960e-22
Identity = 62/148 (41.89%), Postives = 87/148 (58.78%), Query Frame = 0
Query:   96 SHAAAEEISNMED---VPKLKEPVAISDFEALDIRVGRIVLAELVPDPD---HGNKP--SRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLSSSNFSKEPMPRTLRTVLLGGGGVPPGSAVSG 235
            +H    E+    D    P +K  V  S FE++D+RVG I  A+ V D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VL+ ANV    + G+ S G VL+  N+   PMPR+ + +L G G +PPGS V G
Sbjct:   72 AHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219          
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA)

HSP 1 Score: 97.8 bits (242), Expect = 2.710e-21
Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 0
Query:   96 SHAAAEEISNMED---VPKLKEPVAISDFEALDIRVGRIVLAELVPDPD---HGNKP--SRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLSSSNFSKEPMPRTLRTVLLGGGGVPPGS 231
            +H    E+    D    P +K  V  S FE++D+RVG I  A+ V D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VL+ ANV    + G+ S G VL+  N+   PMPR+ + +L G G +PPGS
Sbjct:   44 AHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGS 187          
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: A0A1F8JXF2_9BACT (Methionine--tRNA ligase n=1 Tax=Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 TaxID=1797606 RepID=A0A1F8JXF2_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 3.180e-13
Identity = 40/103 (38.83%), Postives = 64/103 (62.14%), Query Frame = 0
Query:  105 NMEDVPKLKEPVAISDFEALDIRVGRIVLAELVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLSSSN 207
            N++   KLKE +   DF  LD+RVG+I+ AE V       + S K L + VD+G EKR++VS++      ED IGK V++ AN++   ++G+ S+G +L++ N
Sbjct:  559 NLKSFEKLKEEITYEDFSKLDLRVGKIISAEKV-------EKSNKLLKITVDIGFEKRQIVSSIAKTFKPEDLIGKKVIIVANLKTAKLMGIDSQGMILAAGN 654          
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: L0AB28_CALLD (Protein containing C-terminal region/beta chain of methionyl-tRNA synthetase n=2 Tax=Caldisphaera lagunensis TaxID=200415 RepID=L0AB28_CALLD)

HSP 1 Score: 72.0 bits (175), Expect = 1.310e-12
Identity = 35/94 (37.23%), Postives = 64/94 (68.09%), Query Frame = 0
Query:  112 LKEPVAISDFEALDIRVGRIVLAELVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLSS 205
            L+E +  S+F  +D+RVG+++ AELVP+       SRK + L+VDLG E+R++++ ++     ED +GK V++ AN++ + + GL S+G +L++
Sbjct:    4 LEEKIDYSEFSKIDLRVGKVISAELVPN-------SRKLIKLIVDLGTEQRQILAGLQKWYKPEDFVGKFVVVVANLKSKIMGGLESQGMILAA 90          
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: UPI001AE5ECDA (methionine--tRNA ligase n=1 Tax=Methanolinea mesophila TaxID=547055 RepID=UPI001AE5ECDA)

HSP 1 Score: 77.0 bits (188), Expect = 1.440e-12
Identity = 42/108 (38.89%), Postives = 68/108 (62.96%), Query Frame = 0
Query:  110 PKLKEPVAISDFEALDIRVGRIVLAELVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLSSSNFSKEPMPRTL 217
            PK++E ++I DF  +DIR+G+I+ AE +P        S+K L L+VDLG EKR++VS +      ED +G+ V + AN+   TI G+ SRG +L++ + +   +P T+
Sbjct:  556 PKMEE-ISIEDFCRMDIRIGKILKAEPIPK-------SKKLLRLIVDLGQEKRQIVSGIAQFYTPEDLVGQQVAVLANLAPATIFGVESRGMILAAGDTASLLVPLTV 655          
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: T0M350_9ARCH (Methionyl-tRNA synthetase n=1 Tax=Thermoplasmatales archaeon A-plasma TaxID=667135 RepID=T0M350_9ARCH)

HSP 1 Score: 70.1 bits (170), Expect = 6.600e-12
Identity = 33/94 (35.11%), Postives = 57/94 (60.64%), Query Frame = 0
Query:  111 KLKEPVAISDFEALDIRVGRIVLAELVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLS 204
            ++ E + I DF  ++ R GR+V  E VP        SR  L +VVDLG EKR+++S++      E+ +GK +++  N+++ T +GL S+G +L+
Sbjct:    3 RVSEEIGIEDFRKIEFRTGRVVECEKVPR-------SRSLLRIVVDLGEEKRQIISSISEFYSPEEMVGKTIVVVTNLKKATFMGLESQGMLLA 89          
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Match: A0A1G8X7N8_9EURY (Methionine--tRNA ligase n=1 Tax=Methanoculleus thermophilus TaxID=2200 RepID=A0A1G8X7N8_9EURY)

HSP 1 Score: 74.7 bits (182), Expect = 8.810e-12
Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 0
Query:  101 EEISNMEDVPKLKEP-VAISDFEALDIRVGRIVLAELVPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKVLSSSN 207
            E +   ++  K K P V+I +F  LDIRVG+IV AE +       K S+K   L+VDLG+EKR+VVS +      E+ +GK V M AN+    I G+ SRG +L++ +
Sbjct:  546 ERVEKAKEAAKPKTPTVSIDEFAKLDIRVGQIVSAEPI-------KGSKKLYKLIVDLGSEKRQVVSGIAQFYSPEELVGKDVAMIANLAPAKIFGVESRGMILAAGD 646          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5584.13902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W1_ECTSI1.190e-8796.50tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A836CNH0_9STRA3.790e-5868.53tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S0MGA1_9CRYP1.440e-4255.07Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2K1L6P8_PHYPA1.960e-2241.89tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A9TWI9_PHYPA2.710e-2141.67Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A1F8JXF2_9BACT3.180e-1338.83Methionine--tRNA ligase n=1 Tax=Chlamydiae bacteri... [more]
L0AB28_CALLD1.310e-1237.23Protein containing C-terminal region/beta chain of... [more]
UPI001AE5ECDA1.440e-1238.89methionine--tRNA ligase n=1 Tax=Methanolinea mesop... [more]
T0M350_9ARCH6.600e-1235.11Methionyl-tRNA synthetase n=1 Tax=Thermoplasmatale... [more]
A0A1G8X7N8_9EURY8.810e-1240.74Methionine--tRNA ligase n=1 Tax=Methanoculleus the... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 126..209
e-value: 5.6E-7
score: 29.6
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 120..234
score: 17.914
NoneNo IPR availableGENE3D2.40.50.140coord: 110..232
e-value: 3.7E-20
score: 73.9
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 64..209
NoneNo IPR availablePANTHERPTHR11586:SF33AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN 1coord: 64..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.705
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 116..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5584contigL-elsbetiae_contig5584:5112..10018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5584.13902.1mRNA_L-elsbetiae_contig5584.13902.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5584 5064..10045 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5584.13902.1 ID=prot_L-elsbetiae_contig5584.13902.1|Name=mRNA_L-elsbetiae_contig5584.13902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
MKMSTTSPVLSTATLLLLAAATTSPTCEAFFLAPPSLTAAGASPSTAAAN
AFRDPLPAIGWPQQQEKRQQQQQQQQQQRAAGSGGRRSTAAMMAVSHAAA
EEISNMEDVPKLKEPVAISDFEALDIRVGRIVLAELVPDPDHGNKPSRKY
LSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRG
KVLSSSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold