prot_L-elsbetiae_contig5583.13900.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5583.13900.1
Unique Nameprot_L-elsbetiae_contig5583.13900.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length106
Homology
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BLAST of mRNA_L-elsbetiae_contig5583.13900.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 4.050e-9
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 0 
Query:    5 PEFKNLWERPEVCPPNWASGEKEALNLNGVHPELVRCVDHVFVRGCEAEFLGGLVETSSGSCPTKKPDAAGGNG 78
            P F+ L + PEVC P    G   A     +H  L+RC++ V++RGCE  +LG +V+   G CP ++P    G G
Sbjct:  179 PGFEQLGDNPEVCRPQMEDGADNAFGYEHIHSRLLRCMNRVYLRGCEKAYLGKMVDLE-GFCPKQEPGKRKGAG 251
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5583.13900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRV9_ECTSI4.050e-937.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5583contigL-elsbetiae_contig5583:3040..5165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5583.13900.1mRNA_L-elsbetiae_contig5583.13900.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5583 3031..5165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5583.13900.1 ID=prot_L-elsbetiae_contig5583.13900.1|Name=mRNA_L-elsbetiae_contig5583.13900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp
MDMLPEFKNLWERPEVCPPNWASGEKEALNLNGVHPELVRCVDHVFVRGC
EAEFLGGLVETSSGSCPTKKPDAAGGNGNRMRNRRGLTTKNDRKGGSSGG
SGGSSG
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