prot_L-elsbetiae_contig5567.13876.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5567.13876.1
Unique Nameprot_L-elsbetiae_contig5567.13876.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length202
Homology
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: D8LQL2_ECTSI (Similar to putative transmembrane protein 17 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL2_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 3.210e-103
Identity = 152/203 (74.88%), Postives = 170/203 (83.74%), Query Frame = 0
Query:    1 MFRRRGS--YRRLSVTTAVASNVNANDAYRENPRADRSRYASEISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFLSRPEGEEHARLL 201
            MFRRRG   Y+RL V    +++ +    YRENP ADRSRYASEISSSL LQIL+YYNGL S  YFVL GGL+IEKLYN +F S LQRT+LAP+F+ WAIAEVHR YFG KGNIKEMVPHMCAFLL T+FPQMFCLAFLAFFQEHQFP+DPI+G+I+I FL  E +VGYNGIKAIINKRTAQFFRVAQEE+L RP  EEHARLL
Sbjct:    1 MFRRRGGAGYQRLRVAATDSTHHDVGVTYRENPSADRSRYASEISSSLSLQILIYYNGLLSLIYFVLGGGLVIEKLYNYRFESELQRTVLAPIFISWAIAEVHRFYFGYKGNIKEMVPHMCAFLLMTVFPQMFCLAFLAFFQEHQFPVDPILGAIHIAFLASETIVGYNGIKAIINKRTAQFFRVAQEEYLLRPASEEHARLL 203          
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A836CA77_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA77_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.310e-45
Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 0
Query:   37 RYASEISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEE 187
            RY SE SSSLP Q+L+Y+N +FS  YF++ G L+I K+    F+SPLQR + AP F+IWA+ EV R+YFG  GNI+EMVP M AF+L T+FPQ   + +L  FQE  FP D  +G   +  L  E V G   +++I  KRTAQF R+ Q E
Sbjct:    1 RYQSETSSSLPAQVLMYFNVMFSIIYFIMEGSLVIMKMSQYVFDSPLQRIVCAPAFMIWALVEVFRLYFGYSGNIEEMVPQMTAFVLMTVFPQSLVVLYLTTFQEFVFPADAAMGGTMLALLAAETVAGAGAVRSIARKRTAQFHRMVQTE 151          
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A8J2SKP3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKP3_9STRA)

HSP 1 Score: 135 bits (340), Expect = 8.240e-37
Identity = 70/151 (46.36%), Postives = 94/151 (62.25%), Query Frame = 0
Query:   41 EISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFLSR 191
            EI SSL LQ +++Y G+FS  YF + GG ++ KL N KF + +   L  P+F +W   E+ RI  G  GN+ E VP + AFLL TIFPQ+  + FL F Q+  FP D   GS+ I FL+ EL VG    K +I ++TAQFFR+ QEE + R
Sbjct:   11 EIKSSLGLQQVIFYQGMFSLLYFAICGGCLLNKLQNYKFQNSILFILTLPIFSLWCCIEIVRIGLGYIGNLLEKVPMISAFLLLTIFPQLVAILFLTFLQDPVFPFDTAAGSMMILFLLSELYVGRLTFKTLIERQTAQFFRLCQEEEMER 161          
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A7S2V551_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V551_9STRA)

HSP 1 Score: 133 bits (335), Expect = 8.710e-36
Identity = 66/148 (44.59%), Postives = 95/148 (64.19%), Query Frame = 0
Query:   42 ISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFL 189
            ++SS+ L IL+Y + + S  YF L G LI+ KL +  F SPL + LL P F+I  I +  R YFG +GN+KE VP + AFL+ T FP  F +A++ F QE  +P D +IG + I  ++ E   GY  +K +IN++TA+FFR+ QEE L
Sbjct:   34 VASSVSLHILLYLDSMVSIVYFFLGGSLILHKLSSFDFVSPLHQLLLIPCFIILLICDTSRFYFGFQGNLKERVPQVIAFLMITFFPTFFVMAYMTFVQEVLYPFDVVIGWMFIMLMLLEFYFGYRCVKRLINRQTARFFRLCQEEEL 181          
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A7R9UGE4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGE4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.170e-35
Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = 0
Query:   41 EISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEE 187
            E+SS LPLQ+L+Y+N LFS  +  L    +  KL   ++ S L R L AP  V+W +AE  R++FG +GN+ E VP + AFL+ + FPQ+ C+ FL++FQ    P D I G+I   FL+ EL  GY  ++ +I K+T+QFFR+ QE+
Sbjct:   10 EVSSHLPLQVLLYFNALFSFCFMALEITNVAYKLQYYQYESNLLRLLTAPALVLWTVAEAFRLFFGFRGNLAERVPLLAAFLIVSFFPQLPCILFLSYFQGILLPFDIIGGTILFVFLLAELGFGYQALRRLIRKQTSQFFRLVQED 156          
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: F0YGR8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGR8_AURAN)

HSP 1 Score: 120 bits (302), Expect = 1.760e-31
Identity = 59/130 (45.38%), Postives = 85/130 (65.38%), Query Frame = 0
Query:   62 YFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFLSR 191
            YFV+ GG ++ K+YN +F + + + L  P+F++W+  E+ R+  G  GNIKE VP + AFLL T+FPQ+  + F A  Q+  FP D   GSI I +LV EL VG   +K +I ++TAQFFR+ QEE + R
Sbjct:    3 YFVVCGGCLLNKIYNYEFQNGILKILTLPIFLLWSCTELARVALGYIGNIKERVPMISAFLLLTMFPQVVAVFFFAILQDPVFPFDRAAGSIMIFYLVIELFVGRFTLKTLIQRQTAQFFRLCQEEEIRR 132          
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A0L0D7S4_THETB (Transmembrane protein 17 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D7S4_THETB)

HSP 1 Score: 94.4 bits (233), Expect = 4.050e-20
Identity = 49/142 (34.51%), Postives = 87/142 (61.27%), Query Frame = 0
Query:   40 SEISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQFF 181
            +++++SL LQ+L+YY+GLFS  + ++   ++  K  NL  ++P+ + +   VFVIWA+ E  RI+FG  GN+KE VP + A  L  +FPQ+  L +LA FQ    P + +   I +  ++    VG+   ++++  +T+QF+
Sbjct:   20 TQMAASLLLQMLLYYSGLFSLMWGIITACIMAWKWDNLD-DAPVFQYITMVVFVIWAVVEPLRIWFGFVGNLKEKVPQLAAHCLLNVFPQIPVLIYLAAFQPSLLPFERVANVIQLLLVIVSAGVGFATTRSLVRNQTSQFY 160          
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A0H5RTX2_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RTX2_9EUKA)

HSP 1 Score: 89.7 bits (221), Expect = 7.060e-19
Identity = 49/141 (34.75%), Postives = 80/141 (56.74%), Query Frame = 0
Query:   41 EISSSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFV-IWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQF 180
            ++SSSL LQIL+YYN  +S  Y V+   ++I      K+      ++L P+ + IW + E  R+     GN++E + H+ AF   T+FPQ F + ++   Q+H    +    SI IGFLV EL++GY+ I+ I+  +  +F
Sbjct:   34 QMSSSLSLQILLYYNVWYSGLYAVV--NILITSFKISKYKDDQFVSVLTPILLGIWCLVEPCRLALAYAGNLQERIQHLAAFFFLTLFPQAFLVVYVLAIQKHVLTGETTSASIQIGFLVAELIIGYHTIQYIVKIQATRF 172          
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: A0A8J5XUQ2_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUQ2_DIALT)

HSP 1 Score: 86.3 bits (212), Expect = 1.840e-17
Identity = 52/140 (37.14%), Postives = 82/140 (58.57%), Query Frame = 0
Query:   44 SSLPLQILVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPV-FVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQF--PIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQF 180
            +++PLQ+L+Y+N ++S A+  L   L + K Y+  + + L    L P+ F IWA+ E  R++FG  GN+ E V ++ AF L T+FPQ+F  A L F     F  P + I G++ +  L  E  V Y+  + +I+K TAQF
Sbjct:   50 ANVPLQMLIYFNSIYSVAWGALWISLYVYK-YS-YWKADLVSAFLNPILFAIWALIEPLRLWFGNSGNLSEKVGNLAAFFLLTLFPQLF--AHLLFLGAPSFLLPFEAISGALMLVLLAAEAYVSYHATRTLIHKSTAQF 185          
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Match: UPI0014257812 (transmembrane protein 17-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257812)

HSP 1 Score: 79.3 bits (194), Expect = 7.170e-15
Identity = 46/145 (31.72%), Postives = 81/145 (55.86%), Query Frame = 0
Query:   37 RYASEISSSLPLQILVYYNGLFSAAYFVLMGGLI-IEKLYNLKFNSPLQRTLLAPVFVIWAIAEVHRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPIIGSINIGFLVFELVVGYNGIKAIINKRTAQF 180
            R  +EI +SLPLQ+ +Y+N  F   + +    ++ ++ LY  + N  +  T    V+VI +  EV R+Y G  GN++E VP +  F L T+  Q+   AF+       FP++  +  + +GF+VFE+++GY  +K + N +  +F
Sbjct:   34 RPGNEIVTSLPLQMALYFNVFFFPFWIITCIVMLDLKFLYLQEINQFIYIT----VYVIMSGTEVMRLYLGYLGNLQERVPELAGFWLLTLVLQLPLCAFILLIGSMPFPVERAVHIVFLGFVVFEVIIGYIALKVMSNHQVMKF 174          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5567.13876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQL2_ECTSI3.210e-10374.88Similar to putative transmembrane protein 17 n=1 T... [more]
A0A836CA77_9STRA1.310e-4550.33Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A8J2SKP3_9STRA8.240e-3746.36Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2V551_9STRA8.710e-3644.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9UGE4_9STRA1.170e-3544.22Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
F0YGR8_AURAN1.760e-3145.38Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A0L0D7S4_THETB4.050e-2034.51Transmembrane protein 17 n=1 Tax=Thecamonas trahen... [more]
A0A0H5RTX2_9EUKA7.060e-1934.75Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A8J5XUQ2_DIALT1.840e-1737.14Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
UPI00142578127.170e-1531.72transmembrane protein 17-like n=1 Tax=Anneissia ja... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019184Uncharacterised protein family, transmembrane-17PFAMPF09799Transmemb_17coord: 50..157
e-value: 3.1E-23
score: 82.4
IPR019184Uncharacterised protein family, transmembrane-17PANTHERPTHR13531FAMILY NOT NAMEDcoord: 26..197
NoneNo IPR availablePANTHERPTHR13531:SF6TMEM (HUMAN TRANSMEMBRANE PROTEIN) HOMOLOGcoord: 26..197
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..201
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 52..71
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 86..105
NoneNo IPR availableTMHMMTMhelixcoord: 150..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5567contigL-elsbetiae_contig5567:3884..6177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5567.13876.1mRNA_L-elsbetiae_contig5567.13876.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5567 3765..6211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5567.13876.1 ID=prot_L-elsbetiae_contig5567.13876.1|Name=mRNA_L-elsbetiae_contig5567.13876.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MFRRRGSYRRLSVTTAVASNVNANDAYRENPRADRSRYASEISSSLPLQI
LVYYNGLFSAAYFVLMGGLIIEKLYNLKFNSPLQRTLLAPVFVIWAIAEV
HRIYFGCKGNIKEMVPHMCAFLLTTIFPQMFCLAFLAFFQEHQFPIDPII
GSINIGFLVFELVVGYNGIKAIINKRTAQFFRVAQEEFLSRPEGEEHARL
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019184Uncharacterised_TM-17