prot_L-elsbetiae_contig556.13868.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig556.13868.1
Unique Nameprot_L-elsbetiae_contig556.13868.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length254
Homology
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BLAST of mRNA_L-elsbetiae_contig556.13868.1 vs. uniprot
Match: A0A6H5JLN8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN8_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.830e-24
Identity = 66/94 (70.21%), Postives = 71/94 (75.53%), Query Frame = 0 
Query:  115 AAHFKMVADRFRALMERRERKLEEAMSDPQTRRDLEVMFPGVITGDY-VTLLAGVRGMEEEDFQDLLDAARKRRREEELGAENG-HEGSRKVPK 206
            A H K  A RFRALM+RRER LEEAMSDPQTR DL  MFPG    DY  TLLAGVRGMEE +FQ+LL  ARKRRR E +G+ENG  EG RKVPK
Sbjct:  144 AEHLKKAAARFRALMDRRERSLEEAMSDPQTRTDLAAMFPG--DDDYHTTLLAGVRGMEEGEFQELLSTARKRRRGEGVGSENGVREGIRKVPK 235
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig556.13868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JLN8_9PHAE1.830e-2470.21RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig556contigL-elsbetiae_contig556:3892..7069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig556.13868.1mRNA_L-elsbetiae_contig556.13868.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig556 3892..7318 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig556.13868.1 ID=prot_L-elsbetiae_contig556.13868.1|Name=mRNA_L-elsbetiae_contig556.13868.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=254bp
MDSSASGGRDREGNTSSPSSSEHTHPAAAAADDSKPSSAKMGSPPAGGCS
GAARAGSPGSGKSSAPPSDAEQHAPPSLGQSSGDMDEAGAPGRDPAGDRR
RNQRTPPGEGVEKDAAHFKMVADRFRALMERRERKLEEAMSDPQTRRDLE
VMFPGVITGDYVTLLAGVRGMEEEDFQDLLDAARKRRREEELGAENGHEG
SRKVPKTAAVSSPSSAPPRRSSNSSSGGGAPPPPASWEGGDGRRGQYYAQ
PPPP
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