prot_L-elsbetiae_contig5552.13858.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5552.13858.1
Unique Nameprot_L-elsbetiae_contig5552.13858.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length177
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5552.13858.1 vs. uniprot
Match: D7FQ37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ37_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 8.570e-95
Identity = 143/167 (85.63%), Postives = 152/167 (91.02%), Query Frame = 0 
Query:   11 GYVTEEYDDFPDYIPNMGAWGESKPGATPEASPADMLDLDAFWNGGAEAVDFHDIPVDDRPCYVEMKQFIDDEGLTMLPSETELLERDIQIERKARAKARKERFADEPDEDLVDDALEDVPLGTLEVEVGVIDVPPPPVDFDDNDGYDDGYDSDPG-IAGAESDGMY 176
            GYVTE YDDFPDY+PNMGAWGESKPG TPEA PAD LDLDAFWNGGAEAVDFHDIPV DRP +VEMKQFID+EGLTMLPSETELLERDIQ ER+ARAKARKERFADEPDEDLVDD L+D+PL   E+EVGVIDVPPPPVDFDD+DGYDDGYD D G + GAESDGMY
Sbjct:    9 GYVTEAYDDFPDYVPNMGAWGESKPGNTPEAYPADSLDLDAFWNGGAEAVDFHDIPVVDRPVFVEMKQFIDNEGLTMLPSETELLERDIQTERRARAKARKERFADEPDEDLVDDTLDDLPLDD-EIEVGVIDVPPPPVDFDDSDGYDDGYDPDTGDLGGAESDGMY 174
[Close]
BLAST of mRNA_L-elsbetiae_contig5552.13858.1 vs. uniprot
Match: A0A6H5JNX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX0_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 6.750e-92
Identity = 142/167 (85.03%), Postives = 151/167 (90.42%), Query Frame = 0 
Query:   11 GYVTEEYDDFPDYIPNMGAWGESKPGATPEASPADMLDLDAFWNGGAEAVDFHDIPVDDRPCYVEMKQFIDDEGLTMLPSETELLERDIQIERKARAKARKERFADEPDEDLVDDALEDVPLGTLEVEVGVIDVPPPPVDFDDNDGYDDGYDSDPGIAG-AESDGMY 176
            GYVTE YDDFPDY+PNMGAWGESKPG+TPEA PAD LDLD FWNGGAEAVDFHDIPV DRP +VEMKQFID+EGLTMLPSETELLERDIQ ER+ARAKARKERFADEPDEDLVDD L+D+PL   E+EVGVIDVPPPPVDFDD+DGYDDGYD D G  G AESDGMY
Sbjct:   71 GYVTEAYDDFPDYVPNMGAWGESKPGSTPEAYPADSLDLDDFWNGGAEAVDFHDIPVVDRPVFVEMKQFIDNEGLTMLPSETELLERDIQNERRARAKARKERFADEPDEDLVDDTLDDLPLDD-EIEVGVIDVPPPPVDFDDSDGYDDGYDPDMGGLGEAESDGMY 236
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5552.13858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ37_ECTSI8.570e-9585.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNX0_9PHAE6.750e-9285.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 92..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5552contigL-elsbetiae_contig5552:800..4326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5552.13858.1mRNA_L-elsbetiae_contig5552.13858.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5552 3..5407 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5552.13858.1 ID=prot_L-elsbetiae_contig5552.13858.1|Name=mRNA_L-elsbetiae_contig5552.13858.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=177bp
MCTYNRRPRWGYVTEEYDDFPDYIPNMGAWGESKPGATPEASPADMLDLD
AFWNGGAEAVDFHDIPVDDRPCYVEMKQFIDDEGLTMLPSETELLERDIQ
IERKARAKARKERFADEPDEDLVDDALEDVPLGTLEVEVGVIDVPPPPVD
FDDNDGYDDGYDSDPGIAGAESDGMY*
back to top