prot_L-elsbetiae_contig555.13855.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig555.13855.1
Unique Nameprot_L-elsbetiae_contig555.13855.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length127
Homology
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BLAST of mRNA_L-elsbetiae_contig555.13855.1 vs. uniprot
Match: A0A6H5JC61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC61_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.100e-32
Identity = 74/89 (83.15%), Postives = 76/89 (85.39%), Query Frame = 0 
Query:   10 RGAKPVGQAAAATSASKTSTSVGVAWGGAGAANGPSAQPLGERSSVSVVMTRGKGPMGVASPTASPHLQAHTPARLQEEWPSLADTAAP 98
            RGAK  GQAAA  +A KTS S GVAWGGAGA NGP AQ LGERS V+VV TRGKGPMGVASPTASPHLQAH PARLQEEWPSLADTAAP
Sbjct:  365 RGAKATGQAAAVPTALKTSGSTGVAWGGAGATNGPIAQSLGERSGVAVV-TRGKGPMGVASPTASPHLQAHNPARLQEEWPSLADTAAP 452
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig555.13855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JC61_9PHAE2.100e-3283.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 116..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig555contigL-elsbetiae_contig555:25041..25883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig555.13855.1mRNA_L-elsbetiae_contig555.13855.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig555 25040..25883 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig555.13855.1 ID=prot_L-elsbetiae_contig555.13855.1|Name=mRNA_L-elsbetiae_contig555.13855.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
ATAAQRVAARGAKPVGQAAAATSASKTSTSVGVAWGGAGAANGPSAQPLG
ERSSVSVVMTRGKGPMGVASPTASPHLQAHTPARLQEEWPSLADTAAPAP
APTPTPAAPTTNRTSRNRRKKEKQQQQ
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