prot_L-elsbetiae_contig555.13853.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig555.13853.1
Unique Nameprot_L-elsbetiae_contig555.13853.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length84
Homology
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BLAST of mRNA_L-elsbetiae_contig555.13853.1 vs. uniprot
Match: A0A6H5JBS4_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBS4_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.870e-34
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 0 
Query:    1 MDDLGRKNLRAWLQKSLASHPENDNGLVAYVEAIVGDAEGTDEDLREKWTEKLDDFLAESSGDFTNVLLSGVRSG-KFDSAWRG 83
            M+DLGRK L+ WLQKSL +HPENDNGL+AYVEAIVGDA+G D+DLREKWTEKLDDFLAESS DF  VLL GVR+G  F + W+G
Sbjct:    1 MNDLGRKKLKTWLQKSLGNHPENDNGLIAYVEAIVGDADGPDDDLREKWTEKLDDFLAESSADFAKVLLKGVRNGGNFGTVWKG 84
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig555.13853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JBS4_9PHAE1.870e-3475.00RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig555contigL-elsbetiae_contig555:16540..17496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig555.13853.1mRNA_L-elsbetiae_contig555.13853.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig555 16540..17554 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig555.13853.1 ID=prot_L-elsbetiae_contig555.13853.1|Name=mRNA_L-elsbetiae_contig555.13853.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
MDDLGRKNLRAWLQKSLASHPENDNGLVAYVEAIVGDAEGTDEDLREKWT
EKLDDFLAESSGDFTNVLLSGVRSGKFDSAWRGG
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