prot_L-elsbetiae_contig5546.13847.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5546.13847.1
Unique Nameprot_L-elsbetiae_contig5546.13847.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1036
Homology
BLAST of mRNA_L-elsbetiae_contig5546.13847.1 vs. uniprot
Match: D7G2Y2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y2_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 7.170e-63
Identity = 463/1160 (39.91%), Postives = 521/1160 (44.91%), Query Frame = 0
Query:    1 MSLASLGSLSRSR---RLSGLFDVDEALDDSRAWRNS----------CQQGAGVGFPELFGVGKKGGADGPPPRQQAADVVGANSPRYPAATAXXXXXXXXXXXXXXXXXQAGPLSSATVVATTSQDLP-PPAFVDGGQSGRVQDLSLRVAELRQQRFHDRRLVCRPTHRPRN--SPPPPPVGVHLEPTNPAPETEISSEAGLHRXXXXXXXXXXXXXXXXXXXXXEAGCIDSLLEGSSGVYPGSTGXXXXXXXXXXXXXXXXXXXXXXXXVAASLLRKIGLGPACRQQQXXXXXXXXXXXXXXXXGSIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTS-SWSADSSLRGAAASGTVKRGGLRGRLGQVWSSRRKIEKDTPAAKADGGAGPGSASGNAPPAVLQPAGDGGGGFAFLPAKAAPLASDVGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALP-----------------------STPLGRSNRSFDPDQPLSSG-VDGSNVSLPPQFGTRSAVSSXXXXXXXXXXXXXTRSWFDMSTESQSRLPPGVPPGLWSEPPXXXXXXXXXXXXQGVLAGL--GERVVPATSRPWSEAERETAAAAAAGIALXX-ATLGVDTAAAGGGEPTVSVKTDVE--------------------------EADLLAAELSDLSVSSGGRMKPAPSSAASMPAASMVAQQTRQAQGLQWSGXXXXXXXXXXRGTEVPLTNAEWGMPXXXXXXXXXXXXXXXXXXXXXX-----------------STVVSADTAEACADAGLGPAPPMAPGL-YLRESPRAQSVDVGMLSHMAGSANGGTQPSPQMGWGLNSGGGGDGAQQLSCLGGGASSW---------------------------NGLVPPAGNLLQRSVSVDRTVSDPLHGSHRSGNDRGGXXXXXXXXXXXQFTFRGAIAEGADAGGQDRDRSRLRPALLDGDDSVRAPVLPGTEGEQXXXXXXXXXXXXXXXXXXXPKRKSWSALQAMIPLPGMAGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRRFSLPLRARGGG----------GGLRRPSLPTLPTGERGGVLACGAAALAGGGGTGDNAGSDNGEDV-RGRRPVSSGSWREALPAF 1034
            MSLASLGSLSRSR   RL GLFDVDEALDDSRAWRN            + G+ V   EL G  + G + G      A D V   +        XXXXXXXXXXXXXXXXX                D P PPA VDG   GRVQDLS RVAELRQQ +  R +       PR   +PPP PVGV+L P    P T   SE  L                       +AG  DS+LEGS G   G  G    XXXX                 AAS +RKIGL    RQ Q                GS+E         XXXXXXXXXXXX           S+TS SWSADSS +G +A   VKR GLRGRLGQVWSSRRK+++    +K   G             +++P                         XXXXXXXXXXXXXXXXXXXXXXXXXXXX                           ++PLGRS   FDP+QPL SG VD SNVSLPPQFGT  A +S             TRSWFD S ESQ+R+PP VPPGLW EP              G LA L  G++ VP TSRPWSEAERETAAAAAAGIAL   AT+ V +   GG  P+VS+    +                          + +LL AELSDLSVS GG       S  S+    +      Q QG  W         XXX         A+W  P                                       ST     +AE+  D  LG AP  AP L +   S R+QSVDVGMLSH   S +     +   GWG++ G       +LS   G   SW                           +GL+  +G  LQRSVSVD + S   HGSHR G     XXXX         + R    E A  GG       +                       XXXXXXXXXXXXXXXXXXX  RKSWSAL AMIPLPGM                 XXXXXXXXXXXXXXXXX      LPL A G            G  RRPSLPT  TG    V A G AALAG       AGS +G D  R RR +S  SWR ALP F
Sbjct:    4 MSLASLGSLSRSRSTKRLGGLFDVDEALDDSRAWRNYFLLQHGPAGLSESGSDV-VAELMGKPRAGNSVG----AGAEDTVAGGATSAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTPSPPACVDG--RGRVQDLSQRVAELRQQSYSRRLMATAAVGPPRGRAAPPPLPVGVNLAPDE-TPATS-PSEPKLSPGSVAQRVPPSGVVPGAKAAAVDAGYGDSMLEGSGG---GGRGVDSSXXXXKGRVKGRRRK------AAASFIRKIGLAATGRQHQQHQSEG----------GSLESSAHSGSNNXXXXXXXXXXXXAEG--------SLTSGSWSADSSSQGGSA---VKRAGLRGRLGQVWSSRRKVDRRDSGSKERAGE------------LMRPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLGRS---FDPNQPLLSGSVDDSNVSLPPQFGT--AANSLGASNASFDPNRSTRSWFDTSAESQARVPPEVPPGLWVEP----------QPQHGALAPLAVGQQTVPPTSRPWSEAERETAAAAAAGIALATSATMSVGSTERGG--PSVSISPAQQAXXXXXXXXXXXXXXXXXXLLARPTFDENLLVAELSDLSVSGGGEGNGQDGS--SVGGMCLGDATGEQQQGRMWPNCAAGGEGXXXX-XXXXXXXADWSRPNQQQREAMQGLRWPAAQQRSVPPNGDTAPAHPPMGLSPQSTGARGISAESGIDPMLGQAPTTAPTLQFSGGSTRSQSVDVGMLSHKGQSRDDSGTAAAHTGWGVDGGXXXXXDGRLSRAMG---SWPHQGVDANVVTRSSXXXXXXXTRSLSRSGLIASSGGPLQRSVSVDTSASGVPHGSHRGGGXXXXXXXXEGRTGAQFASLRALQQEAAGTGGF------VPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSWSALHAMIPLPGMXX---------------XXXXXXXXXXXXXXXXXXXXXXXLPLPASGXXXXXXXXXDDDGSSRRPSLPTSTTG----VFADGTAALAGX--XXXXAGSTDGVDGGRRRRRLSGRSWRAALPTF 1062          
BLAST of mRNA_L-elsbetiae_contig5546.13847.1 vs. uniprot
Match: A0A6H5K7Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z9_9PHAE)

HSP 1 Score: 234 bits (597), Expect = 1.650e-59
Identity = 456/1203 (37.91%), Postives = 515/1203 (42.81%), Query Frame = 0
Query:    1 MSLASLGSLSRSR---RLSGLFDVDEALDDSRAWRNS--CQQG-AGVG------FPELFGVGKKGGADGPPPRQQAADVVG-------ANSPRYPAATAXXXXXXXXXXXXXXXXXQAGPLSSATVVAT-TSQDLP-PPAFVDGGQSGRVQDLSLRVAELRQQRFHDRRLVCRPTHRPRN--SPPPPPVGVHLEPTNPAPETEISSEAGLHRXXXXXXXXXXXXXXXXXXXXXEAGCIDSLLEGSSGVYPGSTGXXXXXXXXXXXXXXXXXXXXXXXXVAASLLRKIGLGPACRQQQXXXXXXXXXXXXXXXXGSIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTSSWSADSSLRGA--------------------------------------------------------AASGTVKRGGLRGRLGQVWSSRRKIEKDTPAAKADGGA---------GPGSASGNAPPAVLQPAGDGGGGFAFLPAKAAPLASDVGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALPSTPLGRSNRSFDPDQPLSSG-VDGSNVSLPPQFGTRSAVSSXXXXXXXXXXXXXTRSWFDMSTESQSRLPPGVPPGLWSEPPXXXXXXXXXXXXQGVLAGLG--ERVVPATSRPWSEAERETAAAAAAGIALXX-ATLGVDTAAAGGGEPTVSVKT-------------------------DVEEADLLAAELSDLSVSSGGRMKPAPSSAASMPAASMVAQQTRQAQGLQWSGXXXXXXXXXXRGTEVPLTNAEWGMPXXXXXXXXXXXXXXXXXXXXXX-----------------STVVSADTAEACADAGLGPAPPMAPGLYLRE-SPRAQSVDVGMLSHMAGSANGGTQPSPQMGWGLNSGGGGDGAQQLS--------------------------CLGGGASSWNGLVPPAGNLLQRSVSVDRTVSDPLHGSHRSGNDRGGXXXXXXXXXXXQF-TFRGAIAEGADAGGQDRDRSRLRPAL-LDGDDSVRAPVLPGTEGEQXXXXXXXXXXXXXXXXXXXPKRKSWSALQAMIPLPGMAGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRRFSLPLRARGGG------GGLRRPSLPTLPTGERGGVLACGAAALAGGGGTGDNAGSDNGEDVRGRRPVSSGSWREALPAF 1034
            MSLASLGSLSRSR   RL GLFDVDEALDDS+AWRN    Q G AG+         EL G   K  A  P      A VVG       A++    A  A     XXXXXXXXXXXX      +ATVVA     D+P PPA VDG   GRVQDLS RVAELRQQ +  R +       PR   SPPP PVGV+L P    P +   SE  L                       +AG  +S+LEGS G          XXXXXXXXXXXX          AAS +RKIGL    RQ Q                GS+E       XXXXXXXXXXXXXX             + SW AD S +G                                                         AA   VKR GLRGRLGQVWSSRRK+++     K   G                                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXX    ++PLGRS   FDP+QPL SG VD SNVSLPPQFGT  A +S             TRSWFD S ESQ+R+PP  P GLW EP              GVLA L   +R V  TSRPWSEAERE AAAAA GIA X  AT+ V +   GG  P+VS+                              +  LL AELSDLSVS GG       S  ++    +      Q QG  W        XXXX         A+W  P                                       S+   A +AE+  D  L  AP M P L     S R+QSVDVGMLSH + S +     +   GWG++ GGG  G  +LS                            G  + S +GL+  + + LQRSVSVD +VS   H SHR   D GG           QF + R    E A  GG           L LDGDD + AP L G  G                       RKSWSAL AMIPLPGM                    XXXXXXXXXXXXXX  RRF+LPL A          G  RRPSLPT   G      A G A LAGGGG+  +AGS +G D   RR +S  SWREA P  
Sbjct:  105 MSLASLGSLSRSRSTKRLGGLFDVDEALDDSKAWRNYFLLQHGPAGLSESGNDVVAELMG---KPCAGNPVGAGAEATVVGGARSAGGADAKVEDAGVATAGGAXXXXXXXXXXXXXXXXXXAATVVAEGEGDDIPSPPACVDG--RGRVQDLSERVAELRQQSYSRRLMATAAVGPPRGRASPPPLPVGVNLAPDETPPASP--SEPKLSPGSVAQRVPPSGVVQVAKLTAVDAGSGESMLEGSGG---------GXXXXXXXXXXXXGRVKGRRRKAAASFIRKIGLAATGRQHQQHQSEG----------GSLESSAHSGSXXXXXXXXXXXXXXAEGAL-------TSGSWGADRSSQGGTGGSNTLPYTRSGSDPRSTQAFPNSPSLAAPEPLARGASVGLGALAESSAAATAALAAGSAVKRAGLRGRLGQVWSSRRKVDRSDCGGKERAGELMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPLGRS---FDPNQPLLSGSVDDSNVSLPPQFGT--AANSLGASNASFDPNRSTRSWFDTSAESQARVPPEFPSGLWVEP----------QPQHGVLAPLAVEQRGVAPTSRPWSEAEREAAAAAAXGIAXXAGATISVGSTERGG--PSVSISPARHGGGGXXXXXXXXXXXXXAVLARPTFDEKLLVAELSDLSVSCGGESNGQDGS--NVGGVCLGDATGEQQQGRMWPNCAAAGEXXXXX-XXXXXXXADWSRPNQQQREAMQGLRWTAAQQGSGPPNGDTAPTHPPMGLAPQSSGARAVSAESGMDPMLDQAPTMPPTLQFGGGSTRSQSVDVGMLSHKSQSRDDSRTAAAHTGWGVD-GGGXXGDGRLSRAMGSWPHQGADADVFTRSSXXXXXXXXGTRSLSRSGLIVSSRSPLQRSVSVDTSVSGVPHWSHRG--DGGGGSREEVSGA--QFASLRALQQEAAGTGGFVPXXXXXXXXLALDGDDRMHAPTLSGGGGALEGGQKNQHHQH----------RKSWSALHAMIPLPGMXX------------------XXXXXXXXXXXXXXXXRRFTLPLLASXXXXXXXXDGQSRRPSLPTSTNG----FFANGTAGLAGGGGS--DAGSTDGVDGGRRRRLSGRSWREAFPTL 1215          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5546.13847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2Y2_ECTSI7.170e-6339.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7Z9_9PHAE1.650e-5937.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 78..287
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 78..287
coord: 639..956
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 639..956

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5546contigL-elsbetiae_contig5546:202..3792 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5546.13847.1mRNA_L-elsbetiae_contig5546.13847.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5546 202..3801 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5546.13847.1 ID=prot_L-elsbetiae_contig5546.13847.1|Name=mRNA_L-elsbetiae_contig5546.13847.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1036bp
MSLASLGSLSRSRRLSGLFDVDEALDDSRAWRNSCQQGAGVGFPELFGVG
KKGGADGPPPRQQAADVVGANSPRYPAATAASAAAAAAATAAAGAGAQAG
PLSSATVVATTSQDLPPPAFVDGGQSGRVQDLSLRVAELRQQRFHDRRLV
CRPTHRPRNSPPPPPVGVHLEPTNPAPETEISSEAGLHRGPHRGGESGAA
AAAKAAPAAAEAGCIDSLLEGSSGVYPGSTGGGGIDSSGGSTTRRSKKGG
GRTKKVAASLLRKIGLGPACRQQQQQQQQQQQQQQQHSESGSIESSTSSR
HRSHAPAAGATASDGAEGGSGGGGSGSVTSSWSADSSLRGAAASGTVKRG
GLRGRLGQVWSSRRKIEKDTPAAKADGGAGPGSASGNAPPAVLQPAGDGG
GGFAFLPAKAAPLASDVGSGGGLPPAAAAAAAVGLVPEAAGGGGGGGGSA
LPSTPLGRSNRSFDPDQPLSSGVDGSNVSLPPQFGTRSAVSSLGASNASF
DPNRSTRSWFDMSTESQSRLPPGVPPGLWSEPPPQPQLLQQQQQQQGVLA
GLGERVVPATSRPWSEAERETAAAAAAGIALAAATLGVDTAAAGGGEPTV
SVKTDVEEADLLAAELSDLSVSSGGRMKPAPSSAASMPAASMVAQQTRQA
QGLQWSGSGGVGDGGAGRGTEVPLTNAEWGMPMPQQQQQQQQQQQNAPPA
PAPSSTVVSADTAEACADAGLGPAPPMAPGLYLRESPRAQSVDVGMLSHM
AGSANGGTQPSPQMGWGLNSGGGGDGAQQLSCLGGGASSWNGLVPPAGNL
LQRSVSVDRTVSDPLHGSHRSGNDRGGGGGRGAGGAGAQFTFRGAIAEGA
DAGGQDRDRSRLRPALLDGDDSVRAPVLPGTEGEQQQQQQQQQQQQQQQQ
HHHHPKRKSWSALQAMIPLPGMAGPAAAAAAAAVAAKTADAGQEQQQQQQ
QQQRRQELRRFSLPLRARGGGGGLRRPSLPTLPTGERGGVLACGAAALAG
GGGTGDNAGSDNGEDVRGRRPVSSGSWREALPAFG*
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