prot_L-elsbetiae_contig5542.13845.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5542.13845.1
Unique Nameprot_L-elsbetiae_contig5542.13845.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length71
Homology
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: A0A6H5KI29_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI29_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 3.570e-31
Identity = 53/57 (92.98%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKE 57
            ++VICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEE+TFALR GNSDSANEFKE
Sbjct:  127 MKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEFKE 183          
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: D8LNF2_ECTSI (RanBD1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF2_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 6.760e-30
Identity = 54/58 (93.10%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEV 58
            ++VICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEE+TFALR GNSDSANEFKEV
Sbjct:  304 MKVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEMTFALRFGNSDSANEFKEV 361          
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: A0A1Z5JQI1_FISSO (RanBD1 domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQI1_FISSO)

HSP 1 Score: 92.0 bits (227), Expect = 1.110e-22
Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEVGQTREKERERLCG 71
            ++VI NHV DP+I L+PN GSDRSWVW+AFDF EG+L+E  FA+R G+SD ANEF++     + E E+L G
Sbjct:    1 MKVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEFRDKFLECQSEMEKLLG 71          
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: A0A7S3Q898_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q898_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.480e-22
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEVGQTREKERERL 69
            ++VI NH  DPRI+L PNAGSDRSWVW+AFDF EG+L+E  FALR  +S+ A+EFK   +  +KE E+L
Sbjct:   10 MKVITNHALDPRIILNPNAGSDRSWVWSAFDFAEGELKETVFALRFADSEIADEFKTKFEESQKEMEKL 78          
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: A0A835YXP9_9STRA (RanBP1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP9_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 8.000e-22
Identity = 41/69 (59.42%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEVGQTREKERERL 69
            +++I NHVADPRIVLKPN GSDRSWVW A+DF + +L E  FA+R G+SD+ANEFKE  +  +K+  R+
Sbjct:  123 MKIIANHVADPRIVLKPNLGSDRSWVWTAYDFVDNELVETVFAIRFGSSDAANEFKEKFEEVKKDMARI 191          
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: A0A1Z5JPA6_FISSO (Ran-binding protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPA6_FISSO)

HSP 1 Score: 92.0 bits (227), Expect = 1.600e-21
Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEVGQTREKERERLCG 71
            ++VI NHV DP+I L+PN GSDRSWVW+AFDF EG+L+E  FA+R G+SD ANEF++     + E E+L G
Sbjct:  107 MKVIANHVVDPKIKLEPNVGSDRSWVWSAFDFAEGELKETIFAIRFGDSDIANEFRDKFLECQSEMEKLLG 177          
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: A0A7S1VE37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VE37_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 4.040e-21
Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEVGQTREKERERL 69
            ++VICNHV DPRI L+PN GSDRSWVW+AFDF EG L+E  FA+R  +SD A EFK   +  +KE +++
Sbjct:  101 MKVICNHVLDPRITLEPNVGSDRSWVWSAFDFAEGDLKETVFAIRFSSSDVAKEFKAKFEECQKEMKKI 169          
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: B8CAX3_THAPS (RanGAP, ran-binding protein 1-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAX3_THAPS)

HSP 1 Score: 90.1 bits (222), Expect = 5.510e-21
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEVGQTREK 64
            ++VI NH  DPRIVL+PNAGSDRSWVW+ FDF +G+LEE  FALR  NS+ A EFKE  +  +K
Sbjct:  125 MKVIANHALDPRIVLEPNAGSDRSWVWSCFDFADGELEEKVFALRFANSEVAGEFKEKYEKHQK 188          
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: A0A8J2T1Z3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1Z3_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.030e-20
Identity = 36/56 (64.29%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFK 56
            +++ICNHV DPRI L+PN GSDRSWVW+A+DF+ G+LE+  FA+R GNSD A E+K
Sbjct:  173 MKIICNHVVDPRIELEPNVGSDRSWVWSAWDFSSGELEDTIFAIRFGNSDGAKEYK 228          
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Match: A0A7S2EXM6_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S2EXM6_TRICV)

HSP 1 Score: 88.2 bits (217), Expect = 4.490e-20
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSDSANEFKEVGQTREKERERL 69
            ++VI NH  DPRI L+PNAGSDRSWVW+AFDF EG+L E  FALR  +SD AN+FK      + E E+L
Sbjct:  103 MKVIANHAIDPRIKLEPNAGSDRSWVWSAFDFAEGELVETVFALRFADSDIANDFKTKFTESQSEMEKL 171          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5542.13845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI29_9PHAE3.570e-3192.98RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LNF2_ECTSI6.760e-3093.10RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1Z5JQI1_FISSO1.110e-2257.75RanBD1 domain-containing protein n=1 Tax=Fistulife... [more]
A0A7S3Q898_9STRA3.480e-2259.42Hypothetical protein (Fragment) n=2 Tax=Chaetocero... [more]
A0A835YXP9_9STRA8.000e-2259.42RanBP1 domain-containing protein n=1 Tax=Tribonema... [more]
A0A1Z5JPA6_FISSO1.600e-2157.75Ran-binding protein 1 n=1 Tax=Fistulifera solaris ... [more]
A0A7S1VE37_9STRA4.040e-2157.97Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
B8CAX3_THAPS5.510e-2162.50RanGAP, ran-binding protein 1-like protein (Fragme... [more]
A0A8J2T1Z3_9STRA2.030e-2064.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2EXM6_TRICV4.490e-2059.42Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 1..58
e-value: 1.9E-11
score: 44.3
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 1..68
score: 11.344
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 1..69
e-value: 8.0E-12
score: 46.8
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 1..64
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 1..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5542contigL-elsbetiae_contig5542:10663..10875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5542.13845.1mRNA_L-elsbetiae_contig5542.13845.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5542 10663..10875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5542.13845.1 ID=prot_L-elsbetiae_contig5542.13845.1|Name=mRNA_L-elsbetiae_contig5542.13845.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=71bp
LQVICNHVADPRIVLKPNAGSDRSWVWNAFDFTEGQLEEITFALRLGNSD
SANEFKEVGQTREKERERLCG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf