prot_L-elsbetiae_contig5542.13844.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5542.13844.1
Unique Nameprot_L-elsbetiae_contig5542.13844.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length119
Homology
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: D7FU74_ECTSI (RanBD1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU74_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 3.270e-39
Identity = 106/117 (90.60%), Postives = 107/117 (91.45%), Query Frame = 0
Query:    1 MSDFAQLAAKAKEEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFL 117
            MSDFAQLAAKAKE+GV  XXXXXXXXXXXXXXXXXXXXXXXXXXXX        EESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFL
Sbjct:    1 MSDFAQLAAKAKEDGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------EESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFL 109          
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: A0A6H5KI29_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI29_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 3.420e-36
Identity = 106/118 (89.83%), Postives = 107/118 (90.68%), Query Frame = 0
Query:    1 MSDFAQLAAKAKEEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 118
            MSDFAQLAAKAKE+G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          STAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ
Sbjct:    1 MSDFAQLAAKAKEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------STAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110          
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: A0A7S2XZR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR9_9STRA)

HSP 1 Score: 109 bits (273), Expect = 5.070e-27
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0
Query:   56 ESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 118
            ESTA FEPVVQL+E+EVKTHEE+EEVLWK R KLF+FGETLLNKGTGQK W ERGIGE KFL+
Sbjct:   68 ESTAHFEPVVQLDEIEVKTHEEEEEVLWKWRGKLFVFGETLLNKGTGQKTWNERGIGEFKFLK 130          
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: A0A835YXP9_9STRA (RanBP1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP9_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.220e-25
Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 0
Query:   54 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 118
            E E T  FEPVVQL+EVEVKTHEEDE+VL+KMRAKLF+FGETLLNKG+G K W ERG+GEVKFL+
Sbjct:   42 EAECTTVFEPVVQLDEVEVKTHEEDEQVLYKMRAKLFVFGETLLNKGSGTKTWNERGVGEVKFLK 106          
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: A0A8J2T1Z3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1Z3_9STRA)

HSP 1 Score: 101 bits (252), Expect = 6.940e-24
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 0
Query:   47 SGTATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 118
            S  A    +ESTA+F PVVQL+EVEVKTHEEDE+V +K+RAKLF F ETLLNKG+G+KEW+ERG+GEVK L+
Sbjct:   85 SAQANPEAQESTAEFTPVVQLDEVEVKTHEEDEDVDFKIRAKLFRFSETLLNKGSGKKEWIERGVGEVKILK 156          
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: A0A7S0C0M0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0M0_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.580e-23
Identity = 48/69 (69.57%), Postives = 59/69 (85.51%), Query Frame = 0
Query:   50 ATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 118
            A+ PEEESTA FEPVV+LEEVE K+ EEDEE+L  MR KLF++GETLL+KGTG+K W ERGIGE++ L+
Sbjct:   31 ASTPEEESTATFEPVVRLEEVETKSGEEDEEILHGMRCKLFVYGETLLDKGTGKKSWRERGIGEIRLLK 99          
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: A0A6S8ZTG3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZTG3_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 7.860e-23
Identity = 48/65 (73.85%), Postives = 57/65 (87.69%), Query Frame = 0
Query:   54 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 118
            EEESTA F+PVV+LEEVEVK+ EEDEEV++ MRAKLF+FGETLL+KGTG K W ERGIGE + L+
Sbjct:   26 EEESTATFKPVVELEEVEVKSGEEDEEVVFSMRAKLFLFGETLLDKGTGNKSWRERGIGEARILR 90          
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: A0A7S3NPI9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPI9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.560e-22
Identity = 46/65 (70.77%), Postives = 57/65 (87.69%), Query Frame = 0
Query:   54 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 118
            E EST +F PVVQL+EVEVKT EEDEE+++KMRA+L+ F ETLLNKGTG+KEW+ERG+GE K L+
Sbjct:   79 EAESTQEFTPVVQLDEVEVKTLEEDEEIIFKMRARLYRFAETLLNKGTGKKEWIERGVGEAKLLK 143          
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: B7FP98_PHATC (Predicted protein n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP98_PHATC)

HSP 1 Score: 95.9 bits (237), Expect = 3.970e-22
Identity = 48/71 (67.61%), Postives = 58/71 (81.69%), Query Frame = 0
Query:   48 GTATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 118
            G    PEEESTA FE VV+LEEVEVK+ EE+EEVL+  R+KLFIFGETLL+KGTG K W ERGIG+++ L+
Sbjct:   25 GGENVPEEESTATFEAVVKLEEVEVKSGEEEEEVLFSQRSKLFIFGETLLDKGTGTKSWRERGIGDIRILR 95          
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Match: K0TLK1_THAOC (RanBD1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLK1_THAOC)

HSP 1 Score: 95.5 bits (236), Expect = 4.590e-22
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 0
Query:   50 ATAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 118
            A APEEESTA FEPVV+L+EVEVK+ EE+EE L   R+KLFI+GETLL+KGTG+K W ERGIGE + L+
Sbjct:   29 AEAPEEESTATFEPVVKLDEVEVKSGEEEEETLCTYRSKLFIYGETLLDKGTGKKTWKERGIGEARILR 97          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5542.13844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU74_ECTSI3.270e-3990.60RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KI29_9PHAE3.420e-3689.83RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2XZR9_9STRA5.070e-2782.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YXP9_9STRA1.220e-2578.46RanBP1 domain-containing protein n=1 Tax=Tribonema... [more]
A0A8J2T1Z3_9STRA6.940e-2469.44Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0C0M0_9STRA1.580e-2369.57Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A6S8ZTG3_9STRA7.860e-2373.85Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3NPI9_9STRA2.560e-2270.77Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
B7FP98_PHATC3.970e-2267.61Predicted protein n=4 Tax=Phaeodactylum tricornutu... [more]
K0TLK1_THAOC4.590e-2269.57RanBD1 domain-containing protein n=1 Tax=Thalassio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 5..118
e-value: 2.4E-18
score: 68.6
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 71..118
e-value: 3.0E-10
score: 40.4
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 60..118
score: 17.034
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 18..118
NoneNo IPR availablePANTHERPTHR23138:SF94RAN-SPECIFIC GTPASE-ACTIVATING PROTEINcoord: 18..118
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 59..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5542contigL-elsbetiae_contig5542:6428..8484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5542.13844.1mRNA_L-elsbetiae_contig5542.13844.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5542 6428..8484 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5542.13844.1 ID=prot_L-elsbetiae_contig5542.13844.1|Name=mRNA_L-elsbetiae_contig5542.13844.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
MSDFAQLAAKAKEEGVVAAAAAAAAGDAPETAAAAAETADEAAGGDSGTA
TAPEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKG
TGQKEWVERGIGEVKFLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf
IPR000156Ran_bind_dom