prot_L-elsbetiae_contig5540.13841.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5540.13841.1
Unique Nameprot_L-elsbetiae_contig5540.13841.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length403
Homology
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BLAST of mRNA_L-elsbetiae_contig5540.13841.1 vs. uniprot
Match: D8LIG8_ECTSI (DNA glycosylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG8_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 3.750e-91
Identity = 175/242 (72.31%), Postives = 193/242 (79.75%), Query Frame = 0 
Query:  157 EERVLGTALGGARKKHRQDIGKGRPLVGWDIGAYSNFVFQKLAAAKDCS----EEAGGDVAVASAAAAVTAAAEQEHAGQVSMAQFEALVRAEAAGFWIRRRAASLLQRALGEEQEGNLDAAEAGCAACLAAWPGCASGHLKMARILRARGQSQKRAIKDVEFHLRQALGSASKPGAGEEGQQVAQAASEGLSLLLCQEGRYKEAAKVLKRRGFRYRLSAAVLRYPLPGAAEEPEASTKRRN 394
            E R L  AL  ARKKHRQ+IG GRPLVGWD+ AY+ FVF +LAAA  CS    E          A  AV+AAAE+EHAGQVSM+QFE LVR EAAGF  RRRAASLL+RAL EEQEGNLDAAEAGCAACL+AWP CASGHLKMA+ILRARG S +RAIKDVEFHLRQALGSASKPG G++G++VAQAA+E LSLLLCQEGR KEAAKVLKR GFRYRLSA VLRYPLP  A+ P A  +  N
Sbjct:  142 EARSLSKALESARKKHRQEIGSGRPLVGWDVAAYAGFVFGELAAAV-CSGQGEEXXXXXXXXXGAVDAVSAAAEEEHAGQVSMSQFEGLVRKEAAGFSARRRAASLLRRALEEEQEGNLDAAEAGCAACLSAWPRCASGHLKMAKILRARGVSHQRAIKDVEFHLRQALGSASKPGGGDQGEEVAQAAAERLSLLLCQEGRNKEAAKVLKRHGFRYRLSADVLRYPLPPQAKPPTAVEESGN 382
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BLAST of mRNA_L-elsbetiae_contig5540.13841.1 vs. uniprot
Match: A0A6H5JAX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAX1_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.660e-50
Identity = 129/242 (53.31%), Postives = 147/242 (60.74%), Query Frame = 0 
Query:  157 EERVLGTALGGARKKHRQDIGKGRPLVGWDIGAYSNFVFQKLAAAKDCSEEA----GGDVAVASAAAAVTAAAEQEHAGQVSMAQFEALVRAEAAGFWIRRRAASLLQRALGEEQEGNLDAAEAGCAACLAAWPGCASGHLKMARILRARGQSQKRAIKDVEFHLRQALGSASKPGAGEEGQQVAQAASEGLSLLLCQEGRYKEAAKVLKRRGFRYRLSAAVLRYPLPGAAEEPEASTKRRN 394
            E R L  AL  ARKKHR++IG GRPLVGWD+ AY+ FVF +LAAA  C  +           A A  AV+AAAE+EHAGQV                                   GNLDAAEAGCAACL+AWP CASGHLKMA+ILRARG S             QAL SASK  +G++G++VAQAA+E LSLLLCQEGR KEAAKVLKR GFRYRLSA VLRYPL    + P A  +  N
Sbjct:  272 EARSLSKALERARKKHREEIGSGRPLVGWDVAAYAGFVFGELAAAV-CGGQGEXXXXXXXXXAGAVDAVSAAAEEEHAGQV-----------------------------------GNLDAAEAGCAACLSAWPRCASGHLKMAKILRARGLSH------------QALRSASK--SGDQGEEVAQAAAERLSLLLCQEGRNKEAAKVLKRHGFRYRLSADVLRYPLSPHTKPPTAVEESGN 463
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5540.13841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIG8_ECTSI3.750e-9172.31DNA glycosylase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A6H5JAX1_9PHAE2.660e-5053.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5540contigL-elsbetiae_contig5540:4355..9313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5540.13841.1mRNA_L-elsbetiae_contig5540.13841.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5540 4303..9313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5540.13841.1 ID=prot_L-elsbetiae_contig5540.13841.1|Name=mRNA_L-elsbetiae_contig5540.13841.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=403bp
MEPEVIASDTGKGRSRAEKNAAKRKRKRARAAATSAHANGGATSGSTPSQ
HQLADEASTQEKTKHGEKKKRKLAETVASAKGTPTPARPRGQDGSNSNND
DANNPHRRQQQPQLPQPQQQQQPKKKKKKQKKKNNNPSTPPPPTKPADTG
GAGEEQEERVLGTALGGARKKHRQDIGKGRPLVGWDIGAYSNFVFQKLAA
AKDCSEEAGGDVAVASAAAAVTAAAEQEHAGQVSMAQFEALVRAEAAGFW
IRRRAASLLQRALGEEQEGNLDAAEAGCAACLAAWPGCASGHLKMARILR
ARGQSQKRAIKDVEFHLRQALGSASKPGAGEEGQQVAQAASEGLSLLLCQ
EGRYKEAAKVLKRRGFRYRLSAAVLRYPLPGAAEEPEASTKRRNLAEEAA
APT
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