prot_L-elsbetiae_contig554.13839.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig554.13839.1
Unique Nameprot_L-elsbetiae_contig554.13839.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length228
Homology
BLAST of mRNA_L-elsbetiae_contig554.13839.1 vs. uniprot
Match: D8LH18_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH18_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 2.220e-87
Identity = 155/225 (68.89%), Postives = 168/225 (74.67%), Query Frame = 0
Query:    5 SFQLGLCLGVVLAPISSVRAF-GPRPSSLALSAQQRARSLASTRSLDRRDRDHGRGVRGLRAEAEGGARGAS--EPAEVLKSAVETRKVPMTEVSEALRVLAEDAAATPAFEAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDANAGPLPIGGMRGKCWWKGGPENELAFALGAVKLGPFKIGKDKNEVKTYKFFANDGKILAAKSSSGGFALLSRV 226
            SF  GL   VV A +S V  F G  PS+L  +  +       TR+L+      G   R     AEGG  G    EPA VL++AVETRKVPMTEVSEALRVLA D  +  A  AEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDA AGPLPIGGMRGKCWW+GG ENELAF LGAVKLGPFK GKDKNEVKTYKFF NDGK+LAA+SS+GGFALLSRV
Sbjct:    5 SFCGGLWCLVVSASMSYVGGFVGTSPSALTPAPHR-------TRALESMSEHRGVPKRRRLLYAEGGXXGQESVEPAAVLRTAVETRKVPMTEVSEALRVLAADGGSPLACGAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEASIDATAGPLPIGGMRGKCWWRGGEENELAFMLGAVKLGPFKFGKDKNEVKTYKFFVNDGKVLAARSSAGGFALLSRV 222          
BLAST of mRNA_L-elsbetiae_contig554.13839.1 vs. uniprot
Match: A0A836CJ46_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ46_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.740e-23
Identity = 65/155 (41.94%), Postives = 94/155 (60.65%), Query Frame = 0
Query:   80 VLKSAVETRKVPMTEVSEALRVLAEDAAATPAFEAEDVEG-SWELVFSTQLKSGYMPIRELVGFYPSREEASIDANAGP-LPIGGMRGKCWWK---GGPENELAFALGAVKLGPF---KIGKDKNEVKTYKFFANDGKILAAKSSSGGFALLSRV 226
            VL+S V+TR++P   V +AL  L + A A      +DV+G +WELVFS+QL  GYMP+RE++ F  S  + S+    GP +P+GG++G C W+   G     ++F L  V LGP    K G  +   KTY FF +   +LAA+SS+GG A+L +V
Sbjct:   52 VLES-VDTRQIPAENVVQALESLEQKAQAV---RQQDVDGLNWELVFSSQLSKGYMPVREVICFDISNGKISLSTTFGPGIPLGGIQGTCSWQEPEGSQPGVVSFNLSKVLLGPIAFEKPGAKEAPPKTYSFFFSGDGVLAARSSNGGVAVLKKV 202          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig554.13839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LH18_ECTSI2.220e-8768.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ46_9STRA1.740e-2341.94Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35690FAMILY NOT NAMEDcoord: 34..226
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..227
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.736

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig554contigL-elsbetiae_contig554:32848..36252 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig554.13839.1mRNA_L-elsbetiae_contig554.13839.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig554 32507..36326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig554.13839.1 ID=prot_L-elsbetiae_contig554.13839.1|Name=mRNA_L-elsbetiae_contig554.13839.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp
MLLVSFQLGLCLGVVLAPISSVRAFGPRPSSLALSAQQRARSLASTRSLD
RRDRDHGRGVRGLRAEAEGGARGASEPAEVLKSAVETRKVPMTEVSEALR
VLAEDAAATPAFEAEDVEGSWELVFSTQLKSGYMPIRELVGFYPSREEAS
IDANAGPLPIGGMRGKCWWKGGPENELAFALGAVKLGPFKIGKDKNEVKT
YKFFANDGKILAAKSSSGGFALLSRVT*
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