prot_L-elsbetiae_contig5517.13804.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5517.13804.1
Unique Nameprot_L-elsbetiae_contig5517.13804.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length484
Homology
BLAST of mRNA_L-elsbetiae_contig5517.13804.1 vs. uniprot
Match: D7G5P7_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P7_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 1.240e-93
Identity = 168/251 (66.93%), Postives = 188/251 (74.90%), Query Frame = 0
Query:  161 ALISAMTLSQVVALGDGEGAGAGGGFLRSGWAAAGPQGVS-VSRRL-TCSGDSDCQGSDADMEALEREGLAISCDEACEDTGSDVFGGAWCDFLGLGGCRACDVFNCAGSTGTCVPCNGDVPDVLEQTEEPLPDADEPLEPGATPSPLSXXGDTDPPFPVEDPDSCTTAMCENSADASDAAYIDDNELTLYCDDKCSDTPSDPFGGLWCNMRGLGQLCRACRADNCVGWTLDDTCLPCNELQETEAPAATP 409
            A +SAMTLSQ      G GAG   GFLRSG A     G   V+RRL  CS DSDCQGSDADMEAL+ EG  I CD ACEDTG+D+FGG WC+  GL GCRACDV+NC GS+G CVPCNG++P      EE  P    P E G T +P+S  G+TDPPFP+ D  SCT A CE++AD++D +YIDDN LTLYCDDKCSDTPSDPFGGLWCNMRGLGQLCRACRADNCVGWT DDTCLPCNELQET  P+ TP
Sbjct:    2 AFVSAMTLSQA----SGTGAG---GFLRSGVARITQAGTGQVARRLDACSSDSDCQGSDADMEALDNEGKTIFCDPACEDTGTDIFGGTWCNHFGLEGCRACDVYNCEGSSGACVPCNGELP------EETTP---APQEEGLTLAPISP-GETDPPFPI-DASSCTAAACEDNADSADLSYIDDNSLTLYCDDKCSDTPSDPFGGLWCNMRGLGQLCRACRADNCVGWTEDDTCLPCNELQETLPPSVTP 234          
BLAST of mRNA_L-elsbetiae_contig5517.13804.1 vs. uniprot
Match: A0A6H5KAD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAD4_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 8.640e-47
Identity = 120/224 (53.57%), Postives = 138/224 (61.61%), Query Frame = 0
Query:   72 MGLSGAPPRRCREPGSTWPVPAACSQDDALRPGSAAPSPPPARGRIG---RKRRWESGIAADRRAAMRSLGTADRRRLLRSRGRRGRALVGTALISAMTLSQVVALGDGEGAGAGGGFLRSGWAAAGPQGVS-VSRRL-TCSGDSDCQGSDADMEALEREGLAISCDEACEDTGSDVFGGAWCDFLGLGGCRACDVFNCAGSTGTCVPCNGDVPDVLEQTEEPL 290
            MG  G P  R     +T   P  CS+ +ALRPG A  S      R G   R  R   G AA+R A  + LG A   RL RS  RRGRAL GTA +SAMTLSQ      G GAG   GFLRSG A     G+  V+RRL  CS DSDCQGSDADMEAL+ EG  I CD ACEDTG+D+FGG WC+  GL GCRACDV+NC  S+G CVPC+G++P+  E T  PL
Sbjct:    1 MGPFGGPHGRAMFLETTRQGPEPCSRREALRPGLAGKSTSRWESRRGGGARATRDRGGRAAERSA--KGLGAAAGSRL-RSGWRRGRALAGTAFVSAMTLSQA----SGTGAG---GFLRSGVARIAQAGIGHVARRLGACSSDSDCQGSDADMEALDNEGKTIFCDPACEDTGTDIFGGTWCNHFGLEGCRACDVYNCEASSGPCVPCSGELPE--ETTPAPL 212          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5517.13804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5P7_ECTSI1.240e-9366.93Similar to Mucin-1 (MUC-1) (Polymorphic epithelial... [more]
A0A6H5KAD4_9PHAE8.640e-4753.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5517contigL-elsbetiae_contig5517:2284..12498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5517.13804.1mRNA_L-elsbetiae_contig5517.13804.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5517 2284..12498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5517.13804.1 ID=prot_L-elsbetiae_contig5517.13804.1|Name=mRNA_L-elsbetiae_contig5517.13804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=484bp
EKSGGLEREREGRDSPKPDSSACATHRIPSPVTHIPLVCSVFSDRLKEGR
TGRTFVYWFPRKRSHESARGGMGLSGAPPRRCREPGSTWPVPAACSQDDA
LRPGSAAPSPPPARGRIGRKRRWESGIAADRRAAMRSLGTADRRRLLRSR
GRRGRALVGTALISAMTLSQVVALGDGEGAGAGGGFLRSGWAAAGPQGVS
VSRRLTCSGDSDCQGSDADMEALEREGLAISCDEACEDTGSDVFGGAWCD
FLGLGGCRACDVFNCAGSTGTCVPCNGDVPDVLEQTEEPLPDADEPLEPG
ATPSPLSPGGDTDPPFPVEDPDSCTTAMCENSADASDAAYIDDNELTLYC
DDKCSDTPSDPFGGLWCNMRGLGQLCRACRADNCVGWTLDDTCLPCNELQ
ETEAPAATPAPSETPAPSETAAPIETPAPSETPAPSETVAPVETPAPSET
PAPSETPAPSETPAPSETPAPSETPAPSETPAPS
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