prot_L-elsbetiae_contig5513.13795.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5513.13795.1
Unique Nameprot_L-elsbetiae_contig5513.13795.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length197
Homology
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BLAST of mRNA_L-elsbetiae_contig5513.13795.1 vs. uniprot
Match: D8LIA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA1_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 5.370e-55
Identity = 106/131 (80.92%), Postives = 112/131 (85.50%), Query Frame = 0 
Query:    1 TRNKAVKAATPELLWSLLREPSVSRHKSCEAVTSFFAEMLRISPAPRGSAGGGADEGWGGSGYLHHHKFLGQCIDFLREKAECVPPSGVLSEAEEAAVSRSLELVRFLLENFHSQHVGDVVQLYAFPSRSK 131
            TRNKAVKAATPELLWSLLREPSVSRHKSCEAVTSFFA+ML+ISP    + GGG  EG G +GYLHHHKFLGQCIDFLREKAECVPPSGVLSEAEEAAVSRSLELVRFLLENF+S        LY FP +SK
Sbjct:   46 TRNKAVKAATPELLWSLLREPSVSRHKSCEAVTSFFAQMLQISPTL--TTGGGL-EGAGPTGYLHHHKFLGQCIDFLREKAECVPPSGVLSEAEEAAVSRSLELVRFLLENFNS--------LYPFPGKSK 165
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BLAST of mRNA_L-elsbetiae_contig5513.13795.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.750e-50
Identity = 95/114 (83.33%), Postives = 100/114 (87.72%), Query Frame = 0 
Query:    1 TRNKAVKAATPELLWSLLREPSVSRHKSCEAVTSFFAEMLRISPAPRGSAGGGADEGWGGSGYLHHHKFLGQCIDFLREKAECVPPSGVLSEAEEAAVSRSLELVRFLLENFHS 114
            TRNKAVKAAT ELLWSLLREPSV+RHKSCEAVTSFFA+ML+ISP      G    EG G + YLHHHKFLGQCIDFLREKAECVPPSGVLSEAEEAAVSRSLELVRFLLENF+S
Sbjct:  583 TRNKAVKAATTELLWSLLREPSVTRHKSCEAVTSFFAQMLQISPTLTAGVG---PEGGGPARYLHHHKFLGQCIDFLREKAECVPPSGVLSEAEEAAVSRSLELVRFLLENFNS 693
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5513.13795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIA1_ECTSI5.370e-5580.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKZ1_9PHAE2.750e-5083.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5513contigL-elsbetiae_contig5513:6718..8996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5513.13795.1mRNA_L-elsbetiae_contig5513.13795.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5513 6718..8997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5513.13795.1 ID=prot_L-elsbetiae_contig5513.13795.1|Name=mRNA_L-elsbetiae_contig5513.13795.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp
TRNKAVKAATPELLWSLLREPSVSRHKSCEAVTSFFAEMLRISPAPRGSA
GGGADEGWGGSGYLHHHKFLGQCIDFLREKAECVPPSGVLSEAEEAAVSR
SLELVRFLLENFHSQHVGDVVQLYAFPSRSKRAAAAAAARQVKQEQQGQD
QGEGTAETARAKTEARASAGAAGAAAPMVSADAVMEDAAATGVAVKE
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