prot_L-elsbetiae_contig5509.13783.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5509.13783.1
Unique Nameprot_L-elsbetiae_contig5509.13783.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length724
Homology
BLAST of mRNA_L-elsbetiae_contig5509.13783.1 vs. uniprot
Match: D7FJ51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ51_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 1.090e-99
Identity = 359/759 (47.30%), Postives = 413/759 (54.41%), Query Frame = 0
Query:    3 AALLPLLARLPPMCPSPSLPSALPSLLLLAVKVLGAVSGRGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDAAVDVARGAASAREAEAAVDFVRSCVREVWRHGSSSRQHEPTCSLGDSAVASGLGQG--EGGVGKAEPGXXXGDTRVGGACTPPRPGSEGATITGANGTAADDGNGD-DXXXWXXXXXXXXXXXXXXXXXADNAAAAAADTPATLQTAEDEAAAAVEPPLGETAAEAGEVE---VEAGHDAPSSEGSTAVDGDAQREETGPKEDGTASACEEGDEGNDGGDAPSPEGSPANASGPAASILDERSEGTVDGTTTTVDRGEAASLAADEATLPHPPTAAVPEFVHSGAEKATESDXXXXXXXXXXXEETVEVLGGPSGPDAAGDCTNSQEHSIA-------------------AASAGTEPELDAPEVGVTTPAELAASAVXXXXRDGADVTSPPPPAVGDALSLVLAAARAVNELLSYLLAGQGAVDERAAAIGAAAKAWGAIALTVPREVDIDGLAGPLRAALAAPVDECPVTARLALLQAVAVTVKAAAGQDGEGAA-------------AAATLLRLLAPHALQGLRLEVGRAAAAAXAATPGTWGSVGGGVGEEPQEACLLEGVYVAQLAFQAAPQASHGALLGLLLPLYASALALNLPTLGATIGQALLLTARSSGAAFKEAVAYVGAGERQALEGAVRTAILGRGASAGXXXXXXRGSAGSHSRVSGRKLDLSQYSTRG 723
            AALLPLLARL P+CP P L S LPSLLLL+V++LGA SGR LG      XXXXXXXXXXXXXX               D A+G +S  EA+AAVDFVRS VREVWRHG+  ++ E     G+ A A G  QG  EG       G        G   T P P  EGA I   +G  A+D +GD DXXX XXXXXXXXXXXXXXXXX                              G+  +E  + E   V+   DAPSS      DG+         EDG ASA E+                                                                        GA+++  +D XXXXX      E  EVL  P+ PD  G+   SQE S A                   A SA     +D+ + G TTP   +   V           + PPPAV DAL+L+L A RAVN LL++LL G+GA  ERAAAIGAAA+AWGA+ALT+P+E D  GLAGPLR AL +  ++C V+ RLALL AV VTVKAAAG+D   AA             AA  L+RLLAPHAL GLRLEV RAAA AX        +VGG   EEP+EACLLEGV++AQLAF+AAPQASHG LLGLLLPLYASALALNLP LGATIGQALLL ARSS  AFKEAVAYV  GERQALEGAVR A++GRGA         RG  GS SR+SGRKLDLSQYSTRG
Sbjct: 1090 AALLPLLARLVPLCPLPRLSSTLPSLLLLSVRLLGAESGRVLGVAAGSAXXXXXXXXXXXXXXG--------------DAAKGLSSTPEAKAAVDFVRSSVREVWRHGNVQQRQE--AGPGEVARAPGPPQGDVEGAEAVVSAGRGAAVPETGSVSTAPGP-DEGAEIVEGSGVVANDEDGDNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKEESETWQEEAPVVQHKDDAPSSN----KDGE---------EDGYASAAED------------------------------------------------------------------------GADRSAHNDTXXXXXGEA--NEAKEVLQEPADPDDVGNDEGSQETSAAXXXXXXXXXXXXXXXXTTRAESADAPACVDSQDDGATTPENGSTEDVP---------VASPPPAVPDALNLLLGAGRAVNGLLAFLLGGEGATTERAAAIGAAAEAWGAVALTIPQEAD--GLAGPLREALTSSTEKCSVSTRLALLHAVIVTVKAAAGEDDGAAAGQAEADGGAYRKAAATALMRLLAPHALAGLRLEVDRAAAVAX---XXXXXNVGGVADEEPREACLLEGVHLAQLAFKAAPQASHGPLLGLLLPLYASALALNLPMLGATIGQALLLVARSSAGAFKEAVAYVATGERQALEGAVRAAMMGRGAPVAGGDAGGRG-GGSGSRMSGRKLDLSQYSTRG 1729          
BLAST of mRNA_L-elsbetiae_contig5509.13783.1 vs. uniprot
Match: A0A6H5K5D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D2_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 2.010e-60
Identity = 264/647 (40.80%), Postives = 318/647 (49.15%), Query Frame = 0
Query:    3 AALLPLLARLPPMCPSPSLPSALPSLLLLAVKVLGAVSGRGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDAAVDVARGAASAREAEAAVDFVRSCVREVWRHGSSSRQHEPTCSLGDSAVASGLGQGEGGVGKAEP----GXXXGDTRVGGACTPPRPGSEGATITGANGTAA--DDGNGDDXXXWXXXXXXXXXXXXXXXXXADNAAAAAADTPATLQTAE------DEAAAAVEPPLGETAAEAGEVEVEAGHDAPSSEGSTAVDGDAQREETGPKEDGTASACEEGDEGNDGGDAPSPEGSPANASGPAASILDERSEGTVDGTTTTVDRGEAASLAADEATLPHPPTAAVPEFVHSGAEKATESDXXXXXXXXXXXEETVEVLGGPSGPDAAGDCTNSQEHSIAAASAGTEPELDAPEVGVTTPAELAASAVXXXXRDGADVTSP------------PPPAVGDALSLVLAAARAVNELLSYLLAGQGAVDERAAAIGAAAKAWGAIALTVPREVDIDGLAGPLRAALAAPVDECPVTARLALLQAVAVTVKAAAGQDGEGAA-------------AAATLLRLLAPHALQGLRLEVGRAAAAAXAATPGTWGSVGGGVGEEPQEACLLEGVYVAQLA 612
            AALLPLL+RL P+CP P L S LPSLLLL+V++LGA SGR LG      XXXXXXXXXXXXXXX              D A+G +S  EA+AAVDFVRSCVREVWRHG   ++ E     G   VA GLG  +G +  AE     G        G   T P P   GA I   +G  A  +DG+ DD    X     XXXXXXXXX   D++  +  D PA    A       ++AA+       E AAE+GEV V        S G    + +  +EE                                    P     D+      DG     +  E AS A D           V    H+  E  TE+             ET +VL  P  PD  G+  +SQE                       PAE A +      +D  D T+P            PPPAV DAL+L+L A RAVNELL++LL G+GA  ERAAAIGAAA+AWGA+ALT+P+E D  GLAGPLR AL +P ++C V+ RLALL AV VTVKAAAG+D   AA             AA+ L+RLLAPHAL GLRLEV RAA   X               EEP+EACLLEGV++AQLA
Sbjct:  779 AALLPLLSRLVPLCPPPRLSSTLPSLLLLSVRLLGAESGRVLGVAAGSAXXXXXXXXXXXXXXXE-------------DAAKGLSSTPEAKAAVDFVRSCVREVWRHGDIQQRQE----AGPGEVAHGLGPPQGDIEGAEAVPSAGGGAAVPETGSVSTAPGP-DGGAEIVEGSGVVANDEDGDDDDWGDXXFQGAEXXXXXXXXXLQEDSSPPSVNDDPAAAAVAAGSVPAVEDAASEASVGKAEVAAESGEVRVRRND----SSGKGKEESETWQEEA-----------------------------------PVVQDKDDAPSNNNDG-----EEDEHASAAED----------GVDRSAHNDTEDETEN-------------ETKDVLHAPVDPDGVGNDESSQEXXXXXXXXXXXXXXXXXXXXXXXPAESADAPACVDSQDD-DATTPENGSTGDVPIASPPPAVPDALNLLLGAGRAVNELLTFLLGGEGATTERAAAIGAAAEAWGAVALTIPQEAD--GLAGPLREALTSPAEKCSVSTRLALLHAVVVTVKAAAGEDDGAAAGQAEADGGAYRKAAASALMRLLAPHALAGLRLEVDRAAXXXXXXXXXXXXXXV--ADEEPREACLLEGVHLAQLA 1335          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5509.13783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJ51_ECTSI1.090e-9947.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5D2_9PHAE2.010e-6040.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..723
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..37
score: 0.508

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5509contigL-elsbetiae_contig5509:3037..5883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5509.13783.1mRNA_L-elsbetiae_contig5509.13783.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5509 2780..7349 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5509.13783.1 ID=prot_L-elsbetiae_contig5509.13783.1|Name=mRNA_L-elsbetiae_contig5509.13783.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=724bp
MLAALLPLLARLPPMCPSPSLPSALPSLLLLAVKVLGAVSGRGLGLKARA
SGAAATPLQQAGLGVSGGGGGGRGVGDAAVDVARGAASAREAEAAVDFVR
SCVREVWRHGSSSRQHEPTCSLGDSAVASGLGQGEGGVGKAEPGGGGGDT
RVGGACTPPRPGSEGATITGANGTAADDGNGDDDDDWGDDDFQGAEDDFQ
GAEDADNAAAAAADTPATLQTAEDEAAAAVEPPLGETAAEAGEVEVEAGH
DAPSSEGSTAVDGDAQREETGPKEDGTASACEEGDEGNDGGDAPSPEGSP
ANASGPAASILDERSEGTVDGTTTTVDRGEAASLAADEATLPHPPTAAVP
EFVHSGAEKATESDSEKEQESESKTEETVEVLGGPSGPDAAGDCTNSQEH
SIAAASAGTEPELDAPEVGVTTPAELAASAVTTPARDGADVTSPPPPAVG
DALSLVLAAARAVNELLSYLLAGQGAVDERAAAIGAAAKAWGAIALTVPR
EVDIDGLAGPLRAALAAPVDECPVTARLALLQAVAVTVKAAAGQDGEGAA
AAATLLRLLAPHALQGLRLEVGRAAAAAAAATPGTWGSVGGGVGEEPQEA
CLLEGVYVAQLAFQAAPQASHGALLGLLLPLYASALALNLPTLGATIGQA
LLLTARSSGAAFKEAVAYVGAGERQALEGAVRTAILGRGASAGAGDGGGR
GSAGSHSRVSGRKLDLSQYSTRG*
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