prot_L-elsbetiae_contig5502.13777.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5502.13777.1
Unique Nameprot_L-elsbetiae_contig5502.13777.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length130
Homology
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BLAST of mRNA_L-elsbetiae_contig5502.13777.1 vs. uniprot
Match: D7FWC0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC0_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 9.070e-13
Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:   44 QRHSGRSAQRMLQDVAGTSDLLKGCIRAREDLGAAKRTILRAREDEARKPTRQTRP--MMVLHSGSWEEAGGASD 116
            QR  G +  R+LQ+VAG+SDLLK CIRARE LG AK  ILR R DEARK +R TR    ++LH GSWE+ G   D
Sbjct:   83 QRQVGDNMHRLLQEVAGSSDLLKDCIRAREALGTAKLRILRDR-DEARKVSRITRSPSAILLHGGSWEDCGWDDD 156
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5502.13777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWC0_ECTSI9.070e-1358.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5502contigL-elsbetiae_contig5502:3801..4190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5502.13777.1mRNA_L-elsbetiae_contig5502.13777.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5502 3801..5163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5502.13777.1 ID=prot_L-elsbetiae_contig5502.13777.1|Name=mRNA_L-elsbetiae_contig5502.13777.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=130bp
MASSPETATISNSTPQPALASVFPINSASDRQQQFGKPSSPFWQRHSGRS
AQRMLQDVAGTSDLLKGCIRAREDLGAAKRTILRAREDEARKPTRQTRPM
MVLHSGSWEEAGGASDWRDWPTVDTVGARP
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