prot_L-elsbetiae_contig550.13773.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig550.13773.1
Unique Nameprot_L-elsbetiae_contig550.13773.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length309
Homology
BLAST of mRNA_L-elsbetiae_contig550.13773.1 vs. uniprot
Match: D7FVF6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVF6_ECTSI)

HSP 1 Score: 491 bits (1263), Expect = 2.680e-172
Identity = 260/308 (84.42%), Postives = 281/308 (91.23%), Query Frame = 0
Query:    1 MGHLQVRVVAAAEISEPNWTRMATNLNINAIGXXXXXXXSALPYVTVSFGKCSERSSAQEALPDSLGTLRASWPRERLSVEVMKGEIRAGENPSLSVQVYNQDNMVQSVLSSAVSTVMGSQGSLLGAGQLEVSPLLAGGAHLIDTWVELEPKGRVHLHVEYEPKGIQPATNDVVFLESFARWEDSLVIPPGAPMVVLGQKMPFLLVAFDTFTEREGRLRLHRNCVSVVERLSWLDVSLATLARPVDALLRTDTGSWCVRKARPLLLPLIVMAAPLQASLLVAFSALKVTLKGVLMGTQAVYQESVVNN 308
            MGH Q+RVVAA+EISEP+W+R+ +NLNINAI XXXXXXXSALPYV VS GKC+ RSSA+EA PDSLGTLRASWPR  LSVEVMKG+IR GE P L+VQVYNQD++VQSVLSSAVSTVMGS+GSLLGAG+L+VS LL+GGAHLIDTWVELEPKGRVH+HVEYEPKGIQP  NDVVFLESFARW DSLVIPPG PMVVL  K PFLLVAFDTFT REGRLRLHRN VS+VERLSWLDVSLA LARPVDALLRTDTGSWCVRK+RPLL PLIV+ APLQASLLVAFSALKV LKGVLMGT AVYQE+VVNN
Sbjct:   66 MGHFQIRVVAASEISEPDWSRVTSNLNINAIXXXXXXXXSALPYVAVSLGKCTVRSSAREAQPDSLGTLRASWPRGMLSVEVMKGDIRPGELPRLAVQVYNQDSIVQSVLSSAVSTVMGSRGSLLGAGELDVSSLLSGGAHLIDTWVELEPKGRVHVHVEYEPKGIQPEKNDVVFLESFARWGDSLVIPPGVPMVVLDSKPPFLLVAFDTFTGREGRLRLHRNTVSLVERLSWLDVSLAMLARPVDALLRTDTGSWCVRKSRPLLQPLIVIVAPLQASLLVAFSALKVALKGVLMGTHAVYQEAVVNN 373          
BLAST of mRNA_L-elsbetiae_contig550.13773.1 vs. uniprot
Match: A0A7S1UJC0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJC0_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.320e-30
Identity = 98/347 (28.24%), Postives = 161/347 (46.40%), Query Frame = 0
Query:    1 MGHLQVRVVAAAEISEPNWTRM---ATNLNINAIGXXXXXXXSALPYVTVSFGKCSERSSAQEALPDSLGTLRAS----WPRERLSVEVMKGEIRAGENPSLSVQVYNQDNMVQSVLSSAVSTVMGSQGSLLGAGQLEVSPLLAGGAHLIDTWVELEP---------KGR----------------------VHLHVEYEPKGIQPATNDVVFLESFARWEDSLVIPPGAPMVVLGQKMPFLLVAFDT-FTEREGRLRLHRNCVSVVERLSWLDVSLATLARPVDALLRTDTGSWCVRKARPLLLPLIVMAAPLQASLLVAFSALKVTLKGVLMGTQAVYQESVVNN 308
            MG +  RVV A  +   +W+ +   A+  N+N             PYV +S G        +  +P   G +R +    W  E+  + V+K  +R+G   +L VQ ++ +N+V  VL + ++       + LG GQ+E+S LL G A ++D WV L+          KG                       VH+ VEYEP+G+ P   D+V+LE FAR   + +IPPG PM V+     + LV F + ++E + +L++HRN + VVERL+ +D    +   P D L  T  G +  R   P +  +  + AP+  +  V    +++ ++    G  A     V N+
Sbjct:   44 MGTVHARVVEAKNLRRLDWSYLQPLASAQNVN-------------PYVKLSMG-----GDEEIRMPICTGVVRGNCNPTWVSEKFILPVLKSAVRSGIAVTLDVQAFHSENVVARVLPNMITG-----NNSLGLGQVELSALLLGEAQVLDVWVPLQTGAHSKVKGGKGEESKDEPRPGAPLQPVVDEFAPAVHIVVEYEPEGLHPQRGDIVYLEPFARSPVNQIIPPGEPMAVIEMSGSYALVGFQSGYSEFKCQLKIHRNAIFVVERLTLVDGIWKSALAPTDYLFGTRVGRFVRRTTGPYVSYVNTLLAPVYFASNVGIGTVRLAVRSAAAGVAATGSTVVGND 367          
BLAST of mRNA_L-elsbetiae_contig550.13773.1 vs. uniprot
Match: W7TJW2_9STRA (C2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJW2_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.080e-27
Identity = 83/232 (35.78%), Postives = 124/232 (53.45%), Query Frame = 0
Query:   72 SWPRERLSVEVMKGEIRAGENPSLSVQVYNQDNMVQSVLSSAVSTVMGSQGSLLGAGQLEVSPLLAG--GAHLIDTWVELEP-KGRVHLHVEYEPKGIQPATNDVVFLESFARWEDSLVIPPGAPMVVLGQKMPFLLVAFDTFTEREGR---------LRLHRNCVSVVERLSWLDVSLATLARPVDALLRTDTGSWCVRKARPLLLPLIVMAAPLQASLLVAFSALKVTLK 291
            SW +ER ++ + KG ++ G    +  Q  +         +S  S + GS+G  LG+G L++ PLL G  G+H++D WV L P  GR+H+ VEYEP G+ P  +DVVF E+FAR   SLV+P   PMVV      +LLV F T T R+ R         LR+HR  V V+ER + LD +  ++    D +       W  ++ +P      V+A P   SL V F+A ++ ++
Sbjct:   90 SW-QERFTMNLKKGVLQEGAPVLVVFQALDA--------ASWRSPLGGSKGRDLGSGSLDILPLLNGSRGSHVMDEWVSLSPGPGRLHVVVEYEPVGMVPEMDDVVFFEAFARSPRSLVLPTNEPMVVRAVSGAYLLVGFRTPTARQARGPEAAPECRLRVHRQTVFVIERHTLLDAAWHSVIDAADMVQAVPPVRWAKKQLQPYAKYAQVLARPALTSLHVTFAAARLAMR 312          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig550.13773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVF6_ECTSI2.680e-17284.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1UJC0_9STRA1.320e-3028.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TJW2_9STRA1.080e-2735.78C2 domain-containing protein n=3 Tax=Monodopsidace... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 1..164
e-value: 1.2E-8
score: 36.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..263
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 287..308
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..286
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 2..163
NoneNo IPR availableTMHMMTMhelixcoord: 264..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig550contigL-elsbetiae_contig550:23973..28814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig550.13773.1mRNA_L-elsbetiae_contig550.13773.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig550 23355..29195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig550.13773.1 ID=prot_L-elsbetiae_contig550.13773.1|Name=mRNA_L-elsbetiae_contig550.13773.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=309bp
MGHLQVRVVAAAEISEPNWTRMATNLNINAIGGGGGGGGSALPYVTVSFG
KCSERSSAQEALPDSLGTLRASWPRERLSVEVMKGEIRAGENPSLSVQVY
NQDNMVQSVLSSAVSTVMGSQGSLLGAGQLEVSPLLAGGAHLIDTWVELE
PKGRVHLHVEYEPKGIQPATNDVVFLESFARWEDSLVIPPGAPMVVLGQK
MPFLLVAFDTFTEREGRLRLHRNCVSVVERLSWLDVSLATLARPVDALLR
TDTGSWCVRKARPLLLPLIVMAAPLQASLLVAFSALKVTLKGVLMGTQAV
YQESVVNN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf